RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 WDR25Q64LD2 544 aaPredicted RBP14.19□□□□□ -0.14
PNKP-210ENST00000597965 SLC7A13Q8TCU3 470 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 FAM46AQ96IP4 442 aaKnown RBP14.19□□□□□ -0.14
PNKP-210ENST00000597965 HOPXQ9BPY8 73 aaPredicted RBP14.19□□□□□ -0.14
PNKP-210ENST00000597965 BTBD10Q9BSF8 475 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 TAS2R1Q9NYW7 299 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 AURKCQ9UQB9 309 aa14.19□□□□□ -0.14
PNKP-210ENST00000597965 B2RBV5 119 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 P2RY10O00398 339 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 SOCS2O14508 198 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 MLNRO43193 412 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 NDUFA2O43678 99 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 PTP4A3O75365 173 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 NDUFA7O95182 113 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 TXNDC12O95881 172 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 H1F0P07305 194 aaKnown RBP14.18□□□□□ -0.14
PNKP-210ENST00000597965 OMGP23515 440 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 RAG2P55895 527 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 FGF12P61328 243 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 HIST1H3AP68431 136 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 LIPEQ05469 1076 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 COX10Q12887 443 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 DEFB112Q30KQ8 113 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 C11orf91Q3C1V1 193 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 SLC36A3Q495N2 470 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 HIST2H3PS2Q5TEC6 136 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 BRD3OSQ6XYD6 125 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 Q6YL49 198 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 COLCA1Q6ZS62 124 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 HIST2H3AQ71DI3 136 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 PNLDC1Q8NA58 520 aaKnown RBP14.18□□□□□ -0.14
PNKP-210ENST00000597965 PLPP7Q8NBV4 271 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 RP9Q8TA86 221 aaKnown RBP14.18□□□□□ -0.14
PNKP-210ENST00000597965 TBC1D15Q8TC07 691 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 SSMEM1Q8WWF3 244 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 WFDC12Q8WWY7 111 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 UTP4Q969X6 686 aaKnown RBP14.18□□□□□ -0.14
PNKP-210ENST00000597965 CDADC1Q9BWV3 514 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 TRIM15Q9C019 465 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 FN3KRPQ9HA64 309 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 ERVK-18Q9QC07 812 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 RPS6KA6Q9UK32 745 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 IER3IP1Q9Y5U9 82 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 ENPP4Q9Y6X5 453 aa14.18□□□□□ -0.14
PNKP-210ENST00000597965 H0YL77 283 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 IMPA2O14732 288 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 GSC2O15499 205 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 SERPINA1P01009 418 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 COX4I1P13073 169 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 ZNF26P17031 533 aaPredicted RBP14.17□□□□□ -0.14
PNKP-210ENST00000597965 PSMB10P40306 273 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 CD200P41217 278 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 FGD3Q5JSP0 725 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 OLFML2AQ68BL7 652 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 BRICD5Q6PL45 260 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 FIP1L1Q6UN15 594 aaKnown RBP14.17□□□□□ -0.14
PNKP-210ENST00000597965 PGAP1Q75T13 922 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 JAZF1Q86VZ6 243 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 OR2AJ1Q8NGZ0 328 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 SPRYD4Q8WW59 207 aaPredicted RBP14.17□□□□□ -0.14
PNKP-210ENST00000597965 GATAD2BQ8WXI9 593 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 CMTM5Q96DZ9 223 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 RSRC1Q96IZ7 334 aaKnown RBP14.17□□□□□ -0.14
PNKP-210ENST00000597965 HSH2DQ96JZ2 352 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 TECTBQ96PL2 329 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 PITX2Q99697 317 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 CADM1Q9BY67 442 aaKnown RBP14.17□□□□□ -0.14
PNKP-210ENST00000597965 LHFPL6Q9Y693 200 aa14.17□□□□□ -0.14
PNKP-210ENST00000597965 A0A0G2JK05 382 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 ZNF879B4DU55 563 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 H0YHG0 523 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 TOX4O94842 621 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 RENP00797 406 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 RHCEP18577 417 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 FUT4P22083 530 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 RBMXP38159 391 aaKnown RBP14.16□□□□□ -0.14
PNKP-210ENST00000597965 MNAT1P51948 309 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 ELF3P78545 371 aaPredicted RBP14.16□□□□□ -0.14
PNKP-210ENST00000597965 MZT1Q08AG7 82 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 GK2Q14410 553 aaPredicted RBP14.16□□□□□ -0.14
PNKP-210ENST00000597965 METTL11BQ5VVY1 283 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 SMARCD3Q6STE5 483 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 ZNF620Q6ZNG0 422 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 SLC15A3Q8IY34 581 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 KIR3DL3Q8N743 410 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 DYRK2Q92630 601 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 FAM162AQ96A26 154 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 RCN3Q96D15 328 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 RAB3IPQ96QF0 476 aaPredicted RBP14.16□□□□□ -0.14
PNKP-210ENST00000597965 ATF6BQ99941 703 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 PCGF1Q9BSM1 259 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 C1orf21Q9H246 121 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 MMP27Q9H306 513 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 MMADHCQ9H3L0 296 aaPredicted RBP14.16□□□□□ -0.14
PNKP-210ENST00000597965 CMTM6Q9NX76 183 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 RNF7Q9UBF6 113 aa14.16□□□□□ -0.14
PNKP-210ENST00000597965 TRAV38-1A0A0B4J264 116 aa14.15□□□□□ -0.14
PNKP-210ENST00000597965 IGHV3-64DA0A0J9YX35 117 aa14.15□□□□□ -0.14
PNKP-210ENST00000597965 MDFIC2A0A1B0GVS7 189 aa14.15□□□□□ -0.14
PNKP-210ENST00000597965 CLPSL1A2RUU4 121 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms