RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 LRRC30A6NM36 301 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 C22orf46C9J442 243 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 IFNL4K9M1U5 179 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 FAM20BO75063 409 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 PPIAL4GP0DN37 164 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 CRABP1P29762 137 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 RPS27P42677 84 aaKnown RBP13.39□□□□□ -0.27
LIM2-202ENST00000596399 MTNR1AP48039 350 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 PSME3P61289 254 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 IL13RA1P78552 427 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 CLEC12AQ5QGZ9 265 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 WDR25Q64LD2 544 aaPredicted RBP13.39□□□□□ -0.27
LIM2-202ENST00000596399 RUSC1-AS1Q66K80 236 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 GLYATQ6IB77 296 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 OR8B3Q8NGG8 313 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 TMIGD2Q96BF3 282 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 OR8B2Q96RD0 313 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 PITX2Q99697 317 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 OR52D1Q9H346 318 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 PNRC2Q9NPJ4 139 aaKnown RBP13.39□□□□□ -0.27
LIM2-202ENST00000596399 RPRD1BQ9NQG5 326 aaKnown RBP13.39□□□□□ -0.27
LIM2-202ENST00000596399 CLN8Q9UBY8 286 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 TMCC3Q9ULS5 477 aa13.39□□□□□ -0.27
LIM2-202ENST00000596399 OR6C68A6NDL8 312 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 FAM181BA6NEQ2 426 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 LCATP04180 440 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 SFTPBP07988 381 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 GGT2P36268 569 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 DEFA6Q01524 100 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 ZNF181Q2M3W8 571 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 RFX4Q33E94 735 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 SFRP4Q6FHJ7 346 aaPredicted RBP13.38□□□□□ -0.27
LIM2-202ENST00000596399 C16orf87Q6PH81 154 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 DNM1P34Q6PK57 102 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 BOLLQ8N9W6 283 aaKnown RBP13.38□□□□□ -0.27
LIM2-202ENST00000596399 SDR9C7Q8NEX9 313 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 FANK1Q8TC84 345 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 PLEKHA8Q96JA3 519 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 DHRS1Q96LJ7 313 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 HCAR1Q9BXC0 346 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 RASSF4Q9H2L5 321 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 MARCH7Q9H992 704 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 DCAF13Q9NV06 445 aaKnown RBP13.38□□□□□ -0.27
LIM2-202ENST00000596399 ZNF446Q9NWS9 450 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 MRPL22Q9NWU5 206 aaKnown RBP13.38□□□□□ -0.27
LIM2-202ENST00000596399 ABCD2Q9UBJ2 740 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 CTSZQ9UBR2 303 aa13.38□□□□□ -0.27
LIM2-202ENST00000596399 PSKH1P11801 424 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 CA6P23280 308 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 MSX2P35548 267 aaPredicted RBP13.37□□□□□ -0.27
LIM2-202ENST00000596399 GATA4P43694 442 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 RAD23AP54725 363 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 TRAP1Q12931 704 aaKnown RBP13.37□□□□□ -0.27
LIM2-202ENST00000596399 SLC35F1Q5T1Q4 408 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 LYPD4Q6UWN0 246 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 HACD2Q6Y1H2 254 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 NLRC3Q7RTR2 1065 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 C1orf87Q8N0U7 546 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 OR2AE1Q8NHA4 323 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 ZNRF4Q8WWF5 429 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 MAP6Q96JE9 813 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 ATF6BQ99941 703 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 PCGF1Q9BSM1 259 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 IFT27Q9BW83 186 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 CCDC134Q9H6E4 229 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 CYB5R1Q9UHQ9 305 aa13.37□□□□□ -0.27
LIM2-202ENST00000596399 POM121CA8CG34 1229 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 C3orf80F5H4A9 247 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 RENP00797 406 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 HLA-DQA2P01906 255 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 IRF2P14316 349 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 SLC6A6P31641 620 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 PYCR1P32322 319 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 PSMB10P40306 273 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 CD200P41217 278 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 RELBQ01201 579 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 SPIBQ01892 262 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 KRT72Q14CN4 511 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 SNAI3Q3KNW1 292 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 PGM2L1Q6PCE3 622 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 DCDC5Q6ZRR9 648 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 PGAP1Q75T13 922 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 ZBTB46Q86UZ6 589 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 KIR3DL3Q8N743 410 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 Q8TCH9 128 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 ZDHHC16Q969W1 377 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 TECTBQ96PL2 329 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 MMADHCQ9H3L0 296 aaPredicted RBP13.36□□□□□ -0.27
LIM2-202ENST00000596399 SMURF1Q9HCE7 757 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 ADA2Q9NZK5 511 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 DOCK11Q5JSL3 2073 aa13.36□□□□□ -0.27
LIM2-202ENST00000596399 TVP23AA6NH52 213 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 PHYHO14832 338 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 ARPC3O15145 178 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 CCDC22O60826 627 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 FCN3O75636 299 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 GADD45GO95257 159 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 FSTL3O95633 263 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 SEMG1P04279 462 aa13.35□□□□□ -0.27
LIM2-202ENST00000596399 CPT2P23786 658 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms