RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 PIMREGQ9BSJ6 248 aa9.47□□□□□ -0.89
VRK3-210ENST00000596121 GABARAPL3Q9BY60 117 aa9.47□□□□□ -0.89
VRK3-210ENST00000596121 RIBC2Q9H4K1 309 aa9.47□□□□□ -0.89
VRK3-210ENST00000596121 MYOZ1Q9NP98 299 aaPredicted RBP9.47□□□□□ -0.89
VRK3-210ENST00000596121 TUBG2Q9NRH3 451 aa9.47□□□□□ -0.89
VRK3-210ENST00000596121 ZNF275Q9NSD4 429 aaPredicted RBP9.47□□□□□ -0.89
VRK3-210ENST00000596121 DCAF16Q9NXF7 216 aa9.47□□□□□ -0.89
VRK3-210ENST00000596121 NKIRAS2Q9NYR9 191 aa9.47□□□□□ -0.89
VRK3-210ENST00000596121 TREM2Q9NZC2 230 aa9.47□□□□□ -0.89
VRK3-210ENST00000596121 ZNF319Q9P2F9 582 aa9.47□□□□□ -0.89
VRK3-210ENST00000596121 HIVEP2P31629 2446 aa9.47□□□□□ -0.89
VRK3-210ENST00000596121 ABCA2Q9BZC7 2435 aa9.47□□□□□ -0.89
VRK3-210ENST00000596121 NAV3Q8IVL0 2385 aa9.46□□□□□ -0.89
VRK3-210ENST00000596121 LRP5LA4QPB2 252 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 H0YL77 283 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 J3QW42 95 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 EI24O14681 340 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 ERCC1P07992 297 aaPredicted RBP9.46□□□□□ -0.9
VRK3-210ENST00000596121 CD55P08174 381 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 ADH4P08319 380 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 MRPL3P09001 348 aaKnown RBP9.46□□□□□ -0.9
VRK3-210ENST00000596121 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.9
VRK3-210ENST00000596121 ALOX5APP20292 161 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 OPRL1P41146 370 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 CRYBB2P43320 205 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 TPTEP56180 551 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 RPS7P62081 194 aaKnown RBP9.46□□□□□ -0.9
VRK3-210ENST00000596121 MOGQ16653 247 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 TMEM249Q2WGJ8 235 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 PCGF3Q3KNV8 242 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 SLC35D3Q5M8T2 416 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 GLYATL3Q5SZD4 288 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 USP51Q70EK9 711 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 CBR4Q8N4T8 237 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 OR2AE1Q8NHA4 323 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 OTOSQ8NHW6 89 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 RAB3IPQ96QF0 476 aaPredicted RBP9.46□□□□□ -0.9
VRK3-210ENST00000596121 KCNJ15Q99712 375 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 RBM4BQ9BQ04 359 aaKnown RBP9.46□□□□□ -0.9
VRK3-210ENST00000596121 COPS4Q9BT78 406 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 USE1Q9NZ43 259 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 GPR160Q9UJ42 338 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 COPS3Q9UNS2 423 aa9.46□□□□□ -0.9
VRK3-210ENST00000596121 SVEP1Q4LDE5 3571 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 PLSCR5A0PG75 271 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 ZNF878C9JN71 531 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 TACSTD2P09758 323 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 IGHV4-31P0DP07 118 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 ACHEP22303 614 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 MRPS11P82912 194 aaKnown RBP9.45□□□□□ -0.9
VRK3-210ENST00000596121 ZNF92Q03936 586 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 ZIK1Q3SY52 487 aaPredicted RBP9.45□□□□□ -0.9
VRK3-210ENST00000596121 DRAM2Q6UX65 266 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 MEPCEQ7L2J0 689 aaKnown RBP9.45□□□□□ -0.9
VRK3-210ENST00000596121 SHFQ7M4L6 423 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 PQLC1Q8N2U9 271 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 RFLNBQ8N5W9 214 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 OR5L1Q8NGL2 311 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 THEM6Q8WUY1 208 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 SPTSSAQ969W0 71 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 SGK3Q96BR1 496 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 COG8Q96MW5 612 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 MBOAT4Q96T53 435 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 CHODLQ9H9P2 273 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 CYSLTR2Q9NS75 346 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 N6AMT1Q9Y5N5 214 aa9.45□□□□□ -0.9
VRK3-210ENST00000596121 MALRD1Q5VYJ5 2156 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 IGHV1-69-2A0A0G2JMI3 117 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 A0A1B0GWJ7 208 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 IQCF6A8MYZ5 107 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 INAFM1C9JVW0 142 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 MAGEB4O15481 346 aaPredicted RBP9.44□□□□□ -0.9
VRK3-210ENST00000596121 MLNRO43193 412 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 CD5LO43866 347 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 HLA-DPB1P04440 258 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 LIPAP38571 399 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 SLC6A9P48067 706 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 CX3CR1P49238 355 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 ALDH3A2P51648 485 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 TNFAIP6P98066 277 aaPredicted RBP9.44□□□□□ -0.9
VRK3-210ENST00000596121 TAF13Q15543 124 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 FAM209AQ5JX71 171 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 AVPI1Q5T686 147 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 NXNL2Q5VZ03 156 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 LRRN1Q6UXK5 716 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 SLC16A9Q7RTY1 509 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 ZNF283Q8N7M2 679 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 BHLHE23Q8NDY6 225 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 OR8G5Q8NG78 346 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 OR2Z1Q8NG97 314 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 OR10AD1Q8NGE0 317 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 SLC30A2Q9BRI3 323 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 REPIN1Q9BWE0 567 aaKnown RBP9.44□□□□□ -0.9
VRK3-210ENST00000596121 TEX12Q9BXU0 123 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 SAP30LQ9HAJ7 183 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 ADGRL4Q9HBW9 690 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 DECR2Q9NUI1 292 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 DNAJC27Q9NZQ0 273 aa9.44□□□□□ -0.9
VRK3-210ENST00000596121 AASSQ9UDR5 926 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms