RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 DOCK11Q5JSL3 2073 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 F5H5K5 113 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 PHYHO14832 338 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 RENP00797 406 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 IRF2P14316 349 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 SLC6A6P31641 620 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 CD200P41217 278 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 PSME3P61289 254 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 MAB21L1Q13394 359 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 SLC36A3Q495N2 470 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 DCDC5Q6ZRR9 648 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 ZBTB46Q86UZ6 589 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 FITM2Q8N6M3 262 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 PITX2Q99697 317 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 ATF6BQ99941 703 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 OR52D1Q9H346 318 aa19.95■□□□□ 0.78
LSM4-202ENST00000593564 HIST1H1CP16403 213 aaKnown RBP19.94■□□□□ 0.78
LSM4-202ENST00000593564 RAD23AP54725 363 aa19.94■□□□□ 0.78
LSM4-202ENST00000593564 PRSS12P56730 875 aa19.94■□□□□ 0.78
LSM4-202ENST00000593564 TRAP1Q12931 704 aaKnown RBP19.94■□□□□ 0.78
LSM4-202ENST00000593564 MALLQ13021 153 aa19.94■□□□□ 0.78
LSM4-202ENST00000593564 WDR25Q64LD2 544 aaPredicted RBP19.94■□□□□ 0.78
LSM4-202ENST00000593564 C16orf87Q6PH81 154 aa19.94■□□□□ 0.78
LSM4-202ENST00000593564 LINC00346Q8IVM7 164 aa19.94■□□□□ 0.78
LSM4-202ENST00000593564 OR11L1Q8NGX0 322 aa19.94■□□□□ 0.78
LSM4-202ENST00000593564 SLITRK2Q9H156 845 aa19.94■□□□□ 0.78
LSM4-202ENST00000593564 PRDM13Q9H4Q3 707 aa19.94■□□□□ 0.78
LSM4-202ENST00000593564 SPAG4Q9NPE6 437 aa19.94■□□□□ 0.78
LSM4-202ENST00000593564 PNRC2Q9NPJ4 139 aaKnown RBP19.94■□□□□ 0.78
LSM4-202ENST00000593564 RPRD1BQ9NQG5 326 aaKnown RBP19.94■□□□□ 0.78
LSM4-202ENST00000593564 CYB5R1Q9UHQ9 305 aa19.94■□□□□ 0.78
LSM4-202ENST00000593564 MDFIC2A0A1B0GVS7 189 aa19.93■□□□□ 0.78
LSM4-202ENST00000593564 GGT2P36268 569 aa19.93■□□□□ 0.78
LSM4-202ENST00000593564 SMIM11AP58511 58 aa19.93■□□□□ 0.78
LSM4-202ENST00000593564 CLEC12AQ5QGZ9 265 aa19.93■□□□□ 0.78
LSM4-202ENST00000593564 ZNF841Q6ZN19 808 aa19.93■□□□□ 0.78
LSM4-202ENST00000593564 OR10S1Q8NGN2 331 aa19.93■□□□□ 0.78
LSM4-202ENST00000593564 OR2AJ1Q8NGZ0 328 aa19.93■□□□□ 0.78
LSM4-202ENST00000593564 OR4K13Q8NH42 304 aa19.93■□□□□ 0.78
LSM4-202ENST00000593564 TAF15Q92804 592 aaKnown RBP eCLIP19.93■□□□□ 0.78
LSM4-202ENST00000593564 CDADC1Q9BWV3 514 aa19.93■□□□□ 0.78
LSM4-202ENST00000593564 FAM20BO75063 409 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 LCATP04180 440 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 PSMB10P40306 273 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 BPIFB3P59826 476 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 FGF12P61328 243 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 DBPQ10586 325 aaPredicted RBP19.92■□□□□ 0.78
LSM4-202ENST00000593564 LYPD2Q6UXB3 125 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 TREML4Q6UXN2 200 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 PGAP1Q75T13 922 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 NAA40Q86UY6 237 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 SLCO4A1Q96BD0 722 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 TMIGD2Q96BF3 282 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 CMTM5Q96DZ9 223 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 IFT27Q9BW83 186 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 GORASP2Q9H8Y8 452 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 NOP16Q9Y3C1 178 aaKnown RBP19.92■□□□□ 0.78
LSM4-202ENST00000593564 MMP24Q9Y5R2 645 aa19.92■□□□□ 0.78
LSM4-202ENST00000593564 ENSAO43768 121 aaKnown RBP19.91■□□□□ 0.78
LSM4-202ENST00000593564 IDH3BO43837 385 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 GMNNO75496 209 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 GADD45GO95257 159 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 SEMG1P04279 462 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 MDKP21741 143 aaPredicted RBP19.91■□□□□ 0.78
LSM4-202ENST00000593564 SPIBQ01892 262 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 DEFB112Q30KQ8 113 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 PRAMEF6Q5VXH4 476 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 BRD3OSQ6XYD6 125 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 SPATC1Q76KD6 591 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 SPRYD4Q8WW59 207 aaPredicted RBP19.91■□□□□ 0.78
LSM4-202ENST00000593564 SLC22A4Q9H015 551 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 KCNG2Q9UJ96 466 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 TMCC3Q9ULS5 477 aa19.91■□□□□ 0.78
LSM4-202ENST00000593564 OR6C68A6NDL8 312 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 SRRM5B3KS81 715 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 C22orf46C9J442 243 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 HOXA3O43365 443 aaPredicted RBP19.9■□□□□ 0.78
LSM4-202ENST00000593564 HLA-DQA2P01906 255 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 NOS3P29474 1203 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 NPY4RP50391 375 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 TPTEP56180 551 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 MPPED2Q15777 294 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 GPR157Q5UAW9 335 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 MRPL21Q7Z2W9 205 aaKnown RBP19.9■□□□□ 0.78
LSM4-202ENST00000593564 C19orf18Q8NEA5 215 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 SDR9C7Q8NEX9 313 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 ZDHHC16Q969W1 377 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 PYURFQ96I23 114 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 FN3KQ9H479 309 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 UFSP2Q9NUQ7 469 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 ZNF446Q9NWS9 450 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 MRPL22Q9NWU5 206 aaKnown RBP19.9■□□□□ 0.78
LSM4-202ENST00000593564 ADA2Q9NZK5 511 aa19.9■□□□□ 0.78
LSM4-202ENST00000593564 M0R135 149 aa19.89■□□□□ 0.77
LSM4-202ENST00000593564 OR10H3O60404 316 aa19.89■□□□□ 0.77
LSM4-202ENST00000593564 PTBP3O95758 552 aaKnown RBP19.89■□□□□ 0.77
LSM4-202ENST00000593564 OR8G1Q15617 311 aa19.89■□□□□ 0.77
LSM4-202ENST00000593564 KCNJ8Q15842 424 aa19.89■□□□□ 0.77
LSM4-202ENST00000593564 ZNF799Q96GE5 643 aa19.89■□□□□ 0.77
LSM4-202ENST00000593564 MAP6Q96JE9 813 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms