RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 F5H6K3 240 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 KMOO15229 486 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ACOX3O15254 700 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 CFLARO15519 480 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 STX10O60499 249 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 SMIM24O75264 130 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 SC5DO75845 299 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 B3GAT3O94766 335 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 VAMP5O95183 116 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 FGF19O95750 216 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 DHFRP00374 187 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 IFNA5P01569 189 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 IGF1P05019 195 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 GSTA1P08263 222 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 COX5BP10606 129 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ANXA3P12429 323 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 NQO1P15559 274 aaKnown RBP3.88□□□□□ -1.79
SMAD4-216ENST00000593223 CMA1P23946 247 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 IVDP26440 423 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 TNFSF9P41273 254 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 GPR1P46091 355 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 IDH2P48735 452 aaKnown RBP3.88□□□□□ -1.79
SMAD4-216ENST00000593223 MFGE8Q08431 387 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-216ENST00000593223 C2orf54Q08AI8 447 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 TCP10Q12799 353 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 KLRB1Q12918 225 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 SELENBP1Q13228 472 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 RIGQ13278 110 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 GPR50Q13585 617 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 EMC2Q15006 297 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 PSG5Q15238 335 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ZNHIT3Q15649 155 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-216ENST00000593223 TMEM249Q2WGJ8 235 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 CHRFAM7AQ494W8 412 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ZCWPW2Q504Y3 356 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 FAM182AQ5T1J6 154 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 SDHAF4Q5VUM1 108 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 LPCAT4Q643R3 524 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 REEP3Q6NUK4 255 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ENPP6Q6UWR7 440 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 TMEM64Q6YI46 380 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ZNF621Q6ZSS3 439 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 SSX6Q7RTT6 188 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 Q8N402 240 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 DHRSXQ8N5I4 330 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 CATSPER1Q8NEC5 780 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ACTL9Q8TC94 416 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 MAGEE2Q8TD90 523 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-216ENST00000593223 SSC4DQ8WTU2 575 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 FAM172AQ8WUF8 416 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 C22orf15Q8WYQ4 148 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 HGDQ93099 445 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ISOC2Q96AB3 205 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 RMND5BQ96G75 393 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-216ENST00000593223 CEP170P1Q96L14 293 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ALKBH3Q96Q83 286 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-216ENST00000593223 FMO2Q99518 471 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 EBNA1BP2Q99848 306 aaKnown RBP3.88□□□□□ -1.79
SMAD4-216ENST00000593223 FEM1AQ9BSK4 669 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ELOVL4Q9GZR5 314 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 PLGRKTQ9HBL7 147 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 S100A14Q9HCY8 104 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ASCL3Q9NQ33 180 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 SIRT7Q9NRC8 400 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 VNN3Q9NY84 501 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 CCDC59Q9P031 241 aaKnown RBP3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ANAPC7Q9UJX3 599 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 RARRES3Q9UL19 164 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 PDE10AQ9Y233 779 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 SLC6A5Q9Y345 797 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 V9GYY9 64 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 TP53BP1Q12888 1972 aaPredicted RBP3.88□□□□□ -1.79
SMAD4-216ENST00000593223 ASXL3Q9C0F0 2248 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 A0A1B0GUL6 1792 aa3.88□□□□□ -1.79
SMAD4-216ENST00000593223 PTPRSQ13332 1948 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 CELSR3Q9NYQ7 3312 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 ANHXE9PGG2 379 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 CASKO14936 926 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 SRPX2O60687 465 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-216ENST00000593223 ADAP1O75689 374 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 CNMDO75829 334 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 DIRAS1O95057 198 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 ACTL6AO96019 429 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 HPP00738 406 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 KLK1P06870 262 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 NPR2P20594 1047 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 ZP3P21754 424 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 CALCRP30988 508 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 MAP3K8P41279 467 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 SLC1A1P43005 524 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 SGSHP51688 502 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 XKP51811 444 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 DEFB103AP81534 67 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 CKAP4Q07065 602 aaKnown RBP3.87□□□□□ -1.79
SMAD4-216ENST00000593223 ZP4Q12836 540 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 BNIP2Q12982 314 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 TFDP1Q14186 410 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 ZNF77Q15935 545 aa3.87□□□□□ -1.79
SMAD4-216ENST00000593223 KCTD19Q17RG1 926 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-216ENST00000593223 RBM48Q5RL73 367 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms