RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 ANKRD33BA6NCL7 494 aa8.78□□□□□ -1
LIG3-216ENST00000593099 A6NJ64 397 aa8.78□□□□□ -1
LIG3-216ENST00000593099 OR2AT4A6NND4 320 aa8.78□□□□□ -1
LIG3-216ENST00000593099 SLC34A2O95436 690 aa8.78□□□□□ -1
LIG3-216ENST00000593099 ZNF81P51508 661 aa8.78□□□□□ -1
LIG3-216ENST00000593099 MGAT2Q10469 447 aa8.78□□□□□ -1
LIG3-216ENST00000593099 IKZF1Q13422 519 aa8.78□□□□□ -1
LIG3-216ENST00000593099 RBM39Q14498 530 aaKnown RBP8.78□□□□□ -1
LIG3-216ENST00000593099 CEBPEQ15744 281 aa8.78□□□□□ -1
LIG3-216ENST00000593099 PRSS53Q2L4Q9 553 aa8.78□□□□□ -1
LIG3-216ENST00000593099 FHL5Q5TD97 284 aa8.78□□□□□ -1
LIG3-216ENST00000593099 RTL6Q6ICC9 239 aa8.78□□□□□ -1
LIG3-216ENST00000593099 LCN10Q6JVE6 187 aa8.78□□□□□ -1
LIG3-216ENST00000593099 CFAP77Q6ZQR2 320 aa8.78□□□□□ -1
LIG3-216ENST00000593099 DTX3Q8N9I9 347 aa8.78□□□□□ -1
LIG3-216ENST00000593099 OR5D18Q8NGL1 313 aa8.78□□□□□ -1
LIG3-216ENST00000593099 OR5H6Q8NGV6 325 aa8.78□□□□□ -1
LIG3-216ENST00000593099 ABHD3Q8WU67 409 aa8.78□□□□□ -1
LIG3-216ENST00000593099 SIGLEC11Q96RL6 698 aa8.78□□□□□ -1
LIG3-216ENST00000593099 NRIP3Q9NQ35 241 aa8.78□□□□□ -1
LIG3-216ENST00000593099 ACOXLQ9NUZ1 547 aa8.78□□□□□ -1
LIG3-216ENST00000593099 PTTG3PQ9NZH4 202 aa8.78□□□□□ -1
LIG3-216ENST00000593099 TP53TG5Q9Y2B4 290 aa8.78□□□□□ -1
LIG3-216ENST00000593099 MRPS28Q9Y2Q9 187 aaKnown RBP8.78□□□□□ -1
LIG3-216ENST00000593099 AMDHD2Q9Y303 409 aa8.78□□□□□ -1
LIG3-216ENST00000593099 MSRB2Q9Y3D2 182 aa8.78□□□□□ -1
LIG3-216ENST00000593099 PTPRDP23468 1912 aa8.78□□□□□ -1
LIG3-216ENST00000593099 ANKRD34BA5PLL1 514 aa8.78□□□□□ -1
LIG3-216ENST00000593099 MCRIP1C9JLW8 97 aa8.78□□□□□ -1
LIG3-216ENST00000593099 ZNF780AO75290 641 aaPredicted RBP8.78□□□□□ -1
LIG3-216ENST00000593099 RLN2P04090 185 aa8.78□□□□□ -1
LIG3-216ENST00000593099 HCCSP53701 268 aa8.78□□□□□ -1
LIG3-216ENST00000593099 BHLHA15Q7RTS1 189 aaPredicted RBP8.78□□□□□ -1
LIG3-216ENST00000593099 OR5H2Q8NGV7 314 aa8.78□□□□□ -1
LIG3-216ENST00000593099 OR4Q3Q8NH05 313 aa8.78□□□□□ -1
LIG3-216ENST00000593099 OR6S1Q8NH40 331 aa8.78□□□□□ -1
LIG3-216ENST00000593099 KCNG3Q8TAE7 436 aa8.78□□□□□ -1
LIG3-216ENST00000593099 FUZQ9BT04 418 aa8.78□□□□□ -1
LIG3-216ENST00000593099 ERRFI1Q9UJM3 462 aaPredicted RBP8.78□□□□□ -1
LIG3-216ENST00000593099 POLDIP2Q9Y2S7 368 aa8.78□□□□□ -1
LIG3-216ENST00000593099 KANTRA0A1W2PQU2 76 aa8.77□□□□□ -1
LIG3-216ENST00000593099 CD3EP07766 207 aa8.77□□□□□ -1
LIG3-216ENST00000593099 ZNF93P35789 620 aaPredicted RBP8.77□□□□□ -1
LIG3-216ENST00000593099 ACAA2P42765 397 aaKnown RBP8.77□□□□□ -1
LIG3-216ENST00000593099 UBE2UQ5VVX9 321 aa8.77□□□□□ -1
LIG3-216ENST00000593099 UNQ6494/PRO21346Q6UXR6 183 aa8.77□□□□□ -1
LIG3-216ENST00000593099 NKAIN3Q8N8D7 197 aa8.77□□□□□ -1
LIG3-216ENST00000593099 UCN2Q96RP3 112 aa8.77□□□□□ -1
LIG3-216ENST00000593099 GPR84Q9NQS5 396 aa8.77□□□□□ -1
LIG3-216ENST00000593099 PLCXD1Q9NUJ7 323 aa8.77□□□□□ -1
LIG3-216ENST00000593099 ZNF69Q9UC07 566 aa8.77□□□□□ -1
LIG3-216ENST00000593099 NEUROG3Q9Y4Z2 214 aa8.77□□□□□ -1
LIG3-216ENST00000593099 LOC102723996A0A087X1L8 192 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 A0A1W2PR80 420 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 CDK2AP1O14519 115 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 HLA-HP01893 362 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 SCG5P05408 212 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 ZNF32P17041 273 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 IL2RGP31785 369 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 OTPQ5XKR4 325 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 CD300LDQ6UXZ3 194 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 KANSL1Q7Z3B3 1105 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 TSPAN32Q96QS1 320 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 KCNJ15Q99712 375 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 TMEM59Q9BXS4 323 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 CLEC2DQ9UHP7 191 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 ING1Q9UK53 422 aaPredicted RBP8.77□□□□□ -1.01
LIG3-216ENST00000593099 R4GMQ9 66 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 LTBP2Q14767 1821 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 CENPVL1A0A0U1RR11 272 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 C16orf97H3BN30 126 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 PRH1P02810 166 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 MPGP29372 298 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 RBMXP38159 391 aaKnown RBP8.77□□□□□ -1.01
LIG3-216ENST00000593099 DDOSTP39656 456 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 CLDN20P56880 219 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 TCF15Q12870 199 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 C2orf76Q3KRA6 126 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 C10orf111Q8N326 155 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 MUL1Q969V5 352 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 OR14A2Q96R54 314 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 OR5M11Q96RB7 305 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 SYNPO2LQ9H987 977 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 ENY2Q9NPA8 101 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 NINQ8N4C6 2090 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 TGOLN2O43493 480 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 TP53P04637 393 aaPredicted RBP8.77□□□□□ -1.01
LIG3-216ENST00000593099 HTR2CP28335 458 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 GNRHRP30968 328 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 UGT2B10P36537 528 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 LSAMPQ13449 338 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 INPP5JQ15735 1006 aaPredicted RBP8.77□□□□□ -1.01
LIG3-216ENST00000593099 SSX8Q7RTT4 187 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 PRR18Q8N4B5 295 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 OR4D11Q8NGI4 311 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 COQ8AQ8NI60 647 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 REEP6Q96HR9 211 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 PDCD1LG2Q9BQ51 273 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 ZNF649Q9BS31 505 aa8.77□□□□□ -1.01
LIG3-216ENST00000593099 GPR173Q9NS66 373 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms