RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ZNF485Q8NCK3 441 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 OR2T27Q8NH04 317 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 OR2AE1Q8NHA4 323 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 LILRB1Q8NHL6 650 aaPredicted RBP8.31□□□□□ -1.08
DDX39A-220ENST00000593008 GATAD2BQ8WXI9 593 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 PELI1Q96FA3 418 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 RADILQ96JH8 1075 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 COQ7Q99807 217 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 TMEM204Q9BSN7 226 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 CXXC4Q9H2H0 198 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 FAM206AQ9NX38 181 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 CNOT2Q9NZN8 540 aaKnown RBP8.31□□□□□ -1.08
DDX39A-220ENST00000593008 GTF2A1LQ9UNN4 478 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 SLC22A13Q9Y226 551 aa8.31□□□□□ -1.08
DDX39A-220ENST00000593008 LSM2Q9Y333 95 aaKnown RBP8.31□□□□□ -1.08
DDX39A-220ENST00000593008 IQCMA0A1B0GVH7 501 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 METTL15A6NJ78 407 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 SNTNA6NMZ2 147 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 SHISA9B4DS77 424 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 M0R135 149 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 HS3ST1O14792 307 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 ANXA2P07355 339 aaKnown RBP8.3□□□□□ -1.08
DDX39A-220ENST00000593008 HSD11B1P28845 292 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 OTX1P32242 354 aaPredicted RBP8.3□□□□□ -1.08
DDX39A-220ENST00000593008 APLNRP35414 380 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 MPV17P39210 176 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 SLC6A9P48067 706 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 PSMA6P60900 246 aaKnown RBP8.3□□□□□ -1.08
DDX39A-220ENST00000593008 PLP2Q04941 152 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 SNTB2Q13425 540 aaKnown RBP8.3□□□□□ -1.08
DDX39A-220ENST00000593008 GALEQ14376 348 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 HLXQ14774 488 aaPredicted RBP8.3□□□□□ -1.08
DDX39A-220ENST00000593008 TAF13Q15543 124 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 RBM48Q5RL73 367 aaKnown RBP8.3□□□□□ -1.08
DDX39A-220ENST00000593008 LIPNQ5VXI9 398 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 C20orf204Q6ZNR8 217 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 FAM57BQ71RH2 274 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 LRP11Q86VZ4 500 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF283Q8N7M2 679 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 WFDC11Q8NEX6 87 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 IL17RDQ8NFM7 739 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 OR8B12Q8NGG6 310 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 OR13C5Q8NGS8 318 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 OR10AC1Q8NH08 325 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 ABHD4Q8TB40 342 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 SNX33Q8WV41 574 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 GTF3AQ92664 365 aaKnown RBP8.3□□□□□ -1.08
DDX39A-220ENST00000593008 RORBQ92753 470 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 PERPQ96FX8 193 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF799Q96GE5 643 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 DOK1Q99704 481 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 KCNJ15Q99712 375 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 JAM3Q9BX67 310 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 CDH20Q9HBT6 801 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 BEX4Q9NWD9 120 aaPredicted RBP8.3□□□□□ -1.08
DDX39A-220ENST00000593008 SCN3BQ9NY72 215 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 PTTG3PQ9NZH4 202 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 MYEF2Q9P2K5 600 aaKnown RBP8.3□□□□□ -1.08
DDX39A-220ENST00000593008 LAMP3Q9UQV4 416 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 TPRKBQ9Y3C4 175 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 VPS13CQ709C8 3753 aa8.3□□□□□ -1.08
DDX39A-220ENST00000593008 PLCE1Q9P212 2302 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 TRIM64A6NGJ6 449 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 E7EQL1 145 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 LMX1BO60663 402 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 LILRA1O75019 489 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 TMCC2O75069 709 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 LCATP04180 440 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 KRT8P05787 483 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 RPSAP08865 295 aaKnown RBP8.29□□□□□ -1.08
DDX39A-220ENST00000593008 ATP6V1B1P15313 513 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 DCKP27707 260 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 RBMXP38159 391 aaKnown RBP8.29□□□□□ -1.08
DDX39A-220ENST00000593008 MAGEB1P43366 347 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 GABARAPL2P60520 117 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 NKX6-1P78426 367 aaPredicted RBP8.29□□□□□ -1.08
DDX39A-220ENST00000593008 EGR3Q06889 387 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 TBC1D28Q2M2D7 210 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 ALKBH6Q3KRA9 238 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF672Q499Z4 452 aaPredicted RBP8.29□□□□□ -1.08
DDX39A-220ENST00000593008 KCTD21Q4G0X4 260 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 WDR38Q5JTN6 314 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 GLYATL3Q5SZD4 288 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF773Q6PK81 442 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 SLC22A25Q6T423 547 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 UNQ6126/PRO20091Q6UXV3 157 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 TGIF2LYQ8IUE0 185 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF679Q8IYX0 411 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 RDH10Q8IZV5 341 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 SPARTQ8N0X7 666 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 KLHL36Q8N4N3 616 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 ASB17Q8WXJ9 295 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 RGP1Q92546 391 aaPredicted RBP8.29□□□□□ -1.08
DDX39A-220ENST00000593008 PIGTQ969N2 578 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 LYZL4Q96KX0 146 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 PPP1R3EQ9H7J1 279 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 G6PC2Q9NQR9 355 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 STARD10Q9Y365 291 aa8.29□□□□□ -1.08
DDX39A-220ENST00000593008 EXOSC1Q9Y3B2 195 aaKnown RBP8.29□□□□□ -1.08
DDX39A-220ENST00000593008 TMEM14AQ9Y6G1 99 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms