RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 OR4C15Q8NGM1 316 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 ZNF420Q8TAQ5 688 aaPredicted RBP11.13□□□□□ -0.63
APOC1-209ENST00000592885 SPTSSAQ969W0 71 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 NEIL1Q96FI4 390 aaPredicted RBP11.13□□□□□ -0.63
APOC1-209ENST00000592885 OR8B2Q96RD0 313 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 PLA2G12AQ9BZM1 189 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 TMEM165Q9HC07 324 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 PNRC2Q9NPJ4 139 aaKnown RBP11.13□□□□□ -0.63
APOC1-209ENST00000592885 TAGLN3Q9UI15 199 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 CDH10Q9Y6N8 788 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 TENM1Q9UKZ4 2725 aa11.13□□□□□ -0.63
APOC1-209ENST00000592885 IGHV2-70DA0A0C4DH43 119 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 OR6C68A6NDL8 312 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 F5H5P2 479 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 CYB5R3P00387 301 aaPredicted RBP11.12□□□□□ -0.63
APOC1-209ENST00000592885 HLA-DQA2P01906 255 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 HKR1P10072 659 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 ZNF823P16415 610 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 PRTN3P24158 256 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 HMGA2P52926 109 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 GNB2P62879 340 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 PAX2Q02962 417 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.12□□□□□ -0.63
APOC1-209ENST00000592885 FOXL1Q12952 345 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 HNRNPA0Q13151 305 aaKnown RBP11.12□□□□□ -0.63
APOC1-209ENST00000592885 RSPO1Q2MKA7 263 aaPredicted RBP11.12□□□□□ -0.63
APOC1-209ENST00000592885 AWAT1Q58HT5 328 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 PGBD2Q6P3X8 592 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 DCDC5Q6ZRR9 648 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 PGAP1Q75T13 922 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 MOGAT3Q86VF5 341 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 ZDHHC21Q8IVQ6 265 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 SIGLECL1Q8N7X8 197 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 OR52E2Q8NGJ4 325 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 OR11L1Q8NGX0 322 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 OR2T4Q8NH00 348 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 C22orf15Q8WYQ4 148 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 DACT3Q96B18 629 aaPredicted RBP11.12□□□□□ -0.63
APOC1-209ENST00000592885 TRIM15Q9C019 465 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 FAM107BQ9H098 131 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 OPA3Q9H6K4 179 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 ZNF69Q9UC07 566 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 PPIAL4AQ9Y536 164 aa11.12□□□□□ -0.63
APOC1-209ENST00000592885 DNAJC9-AS1A6NH13 148 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 F5H5K5 113 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 H0YL77 283 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 CLDN34H7C241 214 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 M0R135 149 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 BHLHE40O14503 412 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 PHYHO14832 338 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 DCTN3O75935 186 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 LCATP04180 440 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 OTX1P32242 354 aaPredicted RBP11.11□□□□□ -0.63
APOC1-209ENST00000592885 MTNR1AP48039 350 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 PITPNBP48739 271 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 RAD23AP54725 363 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 KCNJ8Q15842 424 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 MRPL21Q7Z2W9 205 aaKnown RBP11.11□□□□□ -0.63
APOC1-209ENST00000592885 PARP8Q8N3A8 854 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 PLPP7Q8NBV4 271 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 SPRYD4Q8WW59 207 aaPredicted RBP11.11□□□□□ -0.63
APOC1-209ENST00000592885 RAB40AQ8WXH6 277 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 UPRTQ96BW1 309 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 ZNF799Q96GE5 643 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 CDRT15Q96T59 188 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 TMEM246Q9BRR3 403 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 MS4A7Q9GZW8 240 aaPredicted RBP11.11□□□□□ -0.63
APOC1-209ENST00000592885 FN3KQ9H479 309 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 WDR76Q9H967 626 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 TRIM36Q9NQ86 728 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 MRPL22Q9NWU5 206 aaKnown RBP11.11□□□□□ -0.63
APOC1-209ENST00000592885 IL20Q9NYY1 176 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 BAIAP2Q9UQB8 552 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 LYVE1Q9Y5Y7 322 aa11.11□□□□□ -0.63
APOC1-209ENST00000592885 SPRY1O43609 319 aaPredicted RBP11.1□□□□□ -0.63
APOC1-209ENST00000592885 GMDSO60547 372 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 PTBP3O95758 552 aaKnown RBP11.1□□□□□ -0.63
APOC1-209ENST00000592885 PLATP00750 562 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 RNASE1P07998 156 aaKnown RBP11.1□□□□□ -0.63
APOC1-209ENST00000592885 CD80P33681 288 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 MAGEA2P43356 314 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 NPY4RP50391 375 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 MNAT1P51948 309 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 MAB21L1Q13394 359 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 OR8G1Q15617 311 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 DRAM2Q6UX65 266 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 RASSF6Q6ZTQ3 369 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 PROKR2Q8NFJ6 384 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 SLCO4A1Q96BD0 722 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 MAP6Q96JE9 813 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 DDOQ99489 341 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 MUC13Q9H3R2 512 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 EGLN3Q9H6Z9 239 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 FN3KRPQ9HA64 309 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 ACTR3BQ9P1U1 418 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 CLN8Q9UBY8 286 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 ARL2BPQ9Y2Y0 163 aa11.1□□□□□ -0.63
APOC1-209ENST00000592885 DOCK11Q5JSL3 2073 aa11.09□□□□□ -0.63
APOC1-209ENST00000592885 FAM20BO75063 409 aa11.09□□□□□ -0.63
APOC1-209ENST00000592885 HLA-DPB1P04440 258 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms