RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 DPY19L4Q7Z388 723 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 TIGD4Q8IY51 512 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 OR2Z1Q8NG97 314 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 SPTSSAQ969W0 71 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 MSI2Q96DH6 328 aaKnown RBP13.33□□□□□ -0.28
LIG3-215ENST00000592690 PLEKHA8Q96JA3 519 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 AMELYQ99218 206 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 COPS4Q9BT78 406 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 KRT84Q9NSB2 600 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 CENPMQ9NSP4 180 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 TREM2Q9NZC2 230 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 ZNF878C9JN71 531 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 M0R129 80 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 EBAG9O00559 213 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 PRODHO43272 600 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 SELENOFO60613 162 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 CD55P08174 381 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 SLC2A5P22732 501 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 PRKXP51817 358 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 TMEM33P57088 247 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 ACTR3P61158 418 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 ESRRGP62508 458 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 TNFAIP6P98066 277 aaPredicted RBP13.32□□□□□ -0.28
LIG3-215ENST00000592690 GK2Q14410 553 aaPredicted RBP13.32□□□□□ -0.28
LIG3-215ENST00000592690 SNAPC1Q16533 368 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 KDM4DQ6B0I6 523 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 CXXC5Q7LFL8 322 aaKnown RBP13.32□□□□□ -0.28
LIG3-215ENST00000592690 ZDHHC13Q8IUH4 622 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 CLDND2Q8NHS1 167 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 ELMOD3Q96FG2 381 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 DIRC2Q96SL1 478 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 EGLN1Q9GZT9 426 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 TVP23BQ9NYZ1 205 aa13.32□□□□□ -0.28
LIG3-215ENST00000592690 H3BNX3 289 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 CRLF1O75462 422 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 SLC2A1P11166 492 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 NAA10P41227 235 aaPredicted RBP13.31□□□□□ -0.28
LIG3-215ENST00000592690 MVKQ03426 396 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 TAF13Q15543 124 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 HFEQ30201 348 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 DRAM2Q6UX65 266 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 BHLHE23Q8NDY6 225 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 OR8G5Q8NG78 346 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 OR10AD1Q8NGE0 317 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 OR2AE1Q8NHA4 323 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 ITLN1Q8WWA0 313 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 HPS1Q92902 700 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 CENPNQ96H22 339 aaPredicted RBP13.31□□□□□ -0.28
LIG3-215ENST00000592690 KCNJ15Q99712 375 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 ABHD6Q9BV23 337 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 TEX12Q9BXU0 123 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 DCAF16Q9NXF7 216 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 TMEFF2Q9UIK5 374 aaPredicted RBP13.31□□□□□ -0.28
LIG3-215ENST00000592690 OAZ3Q9UMX2 235 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 KLHDC2Q9Y2U9 406 aa13.31□□□□□ -0.28
LIG3-215ENST00000592690 LOC100289279A0A1B0GTE1 492 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 SAC3D1A6NKF1 404 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 IQCF6A8MYZ5 107 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 CLDN25C9JDP6 229 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 H0YL77 283 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 MLNRO43193 412 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 PRKYO43930 277 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 RPS7P62081 194 aaKnown RBP13.3□□□□□ -0.28
LIG3-215ENST00000592690 APOFQ13790 326 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 GLYATL3Q5SZD4 288 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 SHFQ7M4L6 423 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 RNF133Q8WVZ7 376 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 CCL17Q92583 94 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 ZNF582Q96NG8 517 aaPredicted RBP13.3□□□□□ -0.28
LIG3-215ENST00000592690 CIB1Q99828 191 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 PKP2Q99959 881 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 WIPI2Q9Y4P8 454 aa13.3□□□□□ -0.28
LIG3-215ENST00000592690 ARHGAP32A7KAX9 2087 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 CCDC182A6NF36 153 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 ZAR1LA6NP61 321 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 LMX1BO60663 402 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 TGFAP01135 160 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 TNFSF4P23510 183 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 IGFBP5P24593 272 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 CX3CR1P49238 355 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 CDH15P55291 814 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 GRB2P62993 217 aaKnown RBP13.29□□□□□ -0.28
LIG3-215ENST00000592690 ZNF92Q03936 586 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 MALLQ13021 153 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 SLC35D3Q5M8T2 416 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 SLX4IPQ5VYV7 408 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 FAM166AQ6J272 317 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 PGAP1Q75T13 922 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 MRPL21Q7Z2W9 205 aaKnown RBP13.29□□□□□ -0.28
LIG3-215ENST00000592690 BCDIN3DQ7Z5W3 292 aaKnown RBP13.29□□□□□ -0.28
LIG3-215ENST00000592690 ZNF283Q8N7M2 679 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 OTOSQ8NHW6 89 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 C1orf159Q96HA4 380 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 OR2V2Q96R30 315 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 SLC30A2Q9BRI3 323 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 IL19Q9UHD0 177 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 N6AMT1Q9Y5N5 214 aa13.29□□□□□ -0.28
LIG3-215ENST00000592690 FAM157AC9JC47 383 aa13.28□□□□□ -0.28
LIG3-215ENST00000592690 LYNP07948 512 aa13.28□□□□□ -0.28
LIG3-215ENST00000592690 SELEP16581 610 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms