RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 IQCF1Q8N6M8 205 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 ZNF511Q8NB15 262 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 OR13G1Q8NGZ3 307 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 ZNF799Q96GE5 643 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 MEGF10Q96KG7 1140 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 FEVQ99581 238 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 SLC30A2Q9BRI3 323 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 HCAR1Q9BXC0 346 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 METTL17Q9H7H0 456 aaPredicted RBP11.7□□□□□ -0.54
APOC1-208ENST00000592535 GCM1Q9NP62 436 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 PPP1R3CQ9UQK1 317 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 SVEP1Q4LDE5 3571 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 IGHV3-64DA0A0J9YX35 117 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 DHRS12A0PJE2 317 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 F5H5P2 479 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 EBAG9O00559 213 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 GYG2O15488 501 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 FMO3P31513 532 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 ENTPD1P49961 510 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 SLC25A1P53007 311 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 BTG1P62324 171 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 LCN2P80188 198 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 GK3PQ14409 553 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 ZMYND11Q15326 602 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 DNAL1Q4LDG9 190 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 SLC27A4Q6P1M0 643 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 DCXRQ7Z4W1 244 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 RFLNBQ8N5W9 214 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 ZNF420Q8TAQ5 688 aaPredicted RBP11.69□□□□□ -0.54
APOC1-208ENST00000592535 TEX47Q8TBZ9 253 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 SPTSSAQ969W0 71 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 SLCO4A1Q96BD0 722 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 SLC7A6OSQ96CW6 309 aaPredicted RBP11.69□□□□□ -0.54
APOC1-208ENST00000592535 TMPRSS13Q9BYE2 586 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 CMC2Q9NRP2 79 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 DDX28Q9NUL7 540 aaKnown RBP11.69□□□□□ -0.54
APOC1-208ENST00000592535 METRNQ9UJH8 293 aa11.69□□□□□ -0.54
APOC1-208ENST00000592535 LOC105371242A0A075B767 164 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 A0A0G2JMP0 313 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 A0A0X1KG70 313 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 C5orf63A6NC05 138 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 ARRDC5A6NEK1 342 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 FAM183AA6NL82 134 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 RIIAD1A6NNX1 92 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 H3BN98 237 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 TMEM178BH3BS89 294 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 GNGT2O14610 69 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 TCF21O43680 179 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 IFNGP01579 166 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 HLA-DPB1P04440 258 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 SELEP16581 610 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 ZNF3P17036 446 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 OTX1P32242 354 aaPredicted RBP11.68□□□□□ -0.54
APOC1-208ENST00000592535 SLC6A9P48067 706 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 SRP9P49458 86 aaKnown RBP11.68□□□□□ -0.54
APOC1-208ENST00000592535 MALLQ13021 153 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 FLOT2Q14254 428 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 PCK2Q16822 640 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 SNAI3Q3KNW1 292 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 TMEM155Q4W5P6 130 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 LINC01590Q5TEZ4 76 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 DCAF12L2Q5VW00 463 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 PGAP1Q75T13 922 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 SPATA24Q86W54 205 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 LRRC28Q86X40 367 aaPredicted RBP11.68□□□□□ -0.54
APOC1-208ENST00000592535 SPICQ8N5J4 248 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 OR4M2Q8NGB6 313 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 OR6K6Q8NGW6 343 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 ST7LQ8TDW4 575 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 SLAMF6Q96DU3 332 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 C19orf24Q9BVV8 132 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 MED20Q9H944 212 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 PATZ1Q9HBE1 687 aaKnown RBP11.68□□□□□ -0.54
APOC1-208ENST00000592535 TMEM100Q9NV29 134 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 PDP1Q9P0J1 537 aaPredicted RBP11.68□□□□□ -0.54
APOC1-208ENST00000592535 PCDHB10Q9UN67 800 aa11.68□□□□□ -0.54
APOC1-208ENST00000592535 A0A1B0GWJ7 208 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 ZNF593O00488 134 aaPredicted RBP11.67□□□□□ -0.54
APOC1-208ENST00000592535 CYB5R3P00387 301 aaPredicted RBP11.67□□□□□ -0.54
APOC1-208ENST00000592535 ZFP36P26651 326 aaKnown RBP11.67□□□□□ -0.54
APOC1-208ENST00000592535 GRK5P34947 590 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 PRKXP51817 358 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 SEC61A1P61619 476 aaKnown RBP11.67□□□□□ -0.54
APOC1-208ENST00000592535 BNIP1Q12981 228 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 TEX30Q5JUR7 227 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 LIPNQ5VXI9 398 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 DRAM2Q6UX65 266 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 SPATC1Q76KD6 591 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 MRPL21Q7Z2W9 205 aaKnown RBP11.67□□□□□ -0.54
APOC1-208ENST00000592535 MOGAT3Q86VF5 341 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 HS3ST5Q8IZT8 346 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 KLHL36Q8N4N3 616 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 OR2AE1Q8NHA4 323 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 KCNJ15Q99712 375 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 COPS4Q9BT78 406 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 OCEL1Q9H607 264 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 CENPMQ9NSP4 180 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 POMPQ9Y244 141 aa11.67□□□□□ -0.54
APOC1-208ENST00000592535 DOCK11Q5JSL3 2073 aa11.66□□□□□ -0.54
APOC1-208ENST00000592535 J3QLI3 93 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms