RNA–Protein interactions for RNA: ENST00000592052.1

TMEM259-208, Transcript of transmembrane protein 259, human

Gene TMEM259, Length 1,637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-208	ENST00000592052	OR4A8	P0C604	315 aa		21.32	■■□□□ 1
TMEM259-208	ENST00000592052	MYL12A	P19105	171 aa		21.32	■■□□□ 1
TMEM259-208	ENST00000592052	PSMA6	P60900	246 aa	Known RBP	21.32	■■□□□ 1
TMEM259-208	ENST00000592052	ERVS71-1	P61550	626 aa		21.32	■■□□□ 1
TMEM259-208	ENST00000592052	ZNF829	Q3KNS6	432 aa	Predicted RBP	21.32	■■□□□ 1
TMEM259-208	ENST00000592052	CDON	Q4KMG0	1287 aa		21.32	■■□□□ 1
TMEM259-208	ENST00000592052	RBM48	Q5RL73	367 aa	Known RBP	21.32	■■□□□ 1
TMEM259-208	ENST00000592052	SPATA46	Q5T0L3	261 aa		21.32	■■□□□ 1
TMEM259-208	ENST00000592052	MYDGF	Q969H8	173 aa		21.32	■■□□□ 1
TMEM259-208	ENST00000592052	BRD7	Q9NPI1	651 aa		21.32	■■□□□ 1
TMEM259-208	ENST00000592052	CHCHD3	Q9NX63	227 aa	Known RBP	21.32	■■□□□ 1
TMEM259-208	ENST00000592052	EXOSC1	Q9Y3B2	195 aa	Known RBP	21.32	■■□□□ 1
TMEM259-208	ENST00000592052	RTTN	Q86VV8	2226 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	TMEM269	A0A1B0GVZ9	245 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	TACSTD2	P09758	323 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	TTK	P33981	857 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	SERPINF1	P36955	418 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	TP53I3	Q53FA7	332 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	C20orf204	Q6ZNR8	217 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	FBXL14	Q8N1E6	418 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	SLC25A40	Q8TBP6	338 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	OR2J1	Q9GZK6	312 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	LRRC42	Q9Y546	428 aa		21.31	■■□□□ 1
TMEM259-208	ENST00000592052	LIMS3	P0CW19	117 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	LIMS4	P0CW20	117 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	CRHBP	P24387	322 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	ETV1	P50549	477 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	KRTAP10-9	P60411	292 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	MALL	Q13021	153 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	ZNF718	Q3SXZ3	478 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	LIPN	Q5VXI9	398 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	FAM57B	Q71RH2	274 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	EGFL6	Q8IUX8	553 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	MUC15	Q8N387	334 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	OR52H1	Q8NGJ2	320 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	MARS2	Q96GW9	593 aa	Known RBP	21.3	■■□□□ 1
TMEM259-208	ENST00000592052	ZNF649	Q9BS31	505 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	BLOC1S6	Q9UL45	172 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	FZR1	Q9UM11	496 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	ROS1	P08922	2347 aa		21.3	■■□□□ 1
TMEM259-208	ENST00000592052	ACOD1	A6NK06	481 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052		H3BSA7	217 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	ZNF250	P15622	560 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	GCH1	P30793	250 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	MMP16	P51512	607 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	OR12D2	P58182	307 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	SELENOV	P59797	346 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	SNAI3	Q3KNW1	292 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	PRSS45	Q7RTY3	260 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	SYNPR	Q8TBG9	265 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	KLF14	Q8TD94	323 aa	Predicted RBP	21.29	■■□□□ 1
TMEM259-208	ENST00000592052	MRPL24	Q96A35	216 aa	Known RBP	21.29	■■□□□ 1
TMEM259-208	ENST00000592052	PGAM5	Q96HS1	289 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	FAM206A	Q9NX38	181 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052		J3QLW9	94 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	RPP14	O95059	124 aa	Known RBP	21.29	■■□□□ 1
TMEM259-208	ENST00000592052	ADRA2A	P08913	450 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	ZNF19	P17023	458 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	MVK	Q03426	396 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	AGAP6	Q5VW22	663 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	SYS1	Q8N2H4	156 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	C4orf36	Q96KX1	117 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	OR10A2	Q9H208	303 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	POFUT1	Q9H488	388 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	PLK3	Q9H4B4	646 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	ACOXL	Q9NUZ1	547 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	PTTG3P	Q9NZH4	202 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	DUSP13	Q9UII6	198 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052		R4GMQ9	66 aa		21.29	■■□□□ 1
TMEM259-208	ENST00000592052	FLNB	O75369	2602 aa	Known RBP	21.28	■■□□□ 1
TMEM259-208	ENST00000592052	PLCE1	Q9P212	2302 aa		21.28	■■□□□ 1
TMEM259-208	ENST00000592052	TBX1	O43435	398 aa		21.28	■■□□□ 1
TMEM259-208	ENST00000592052	CDK1	P06493	297 aa		21.28	■■□□□ 1
TMEM259-208	ENST00000592052	DANCR	P0C864	163 aa		21.28	■■□□□ 1
TMEM259-208	ENST00000592052	C21orf33	P30042	268 aa	Predicted RBP	21.28	■■□□□ 1
TMEM259-208	ENST00000592052	KLF3	P57682	345 aa	Predicted RBP	21.28	■■□□□ 1
TMEM259-208	ENST00000592052	SLC35A2	P78381	396 aa		21.28	■■□□□ 1
TMEM259-208	ENST00000592052	MSMP	Q1L6U9	139 aa		21.28	■■□□□ 1
TMEM259-208	ENST00000592052	MBNL2	Q5VZF2	373 aa	Known RBP	21.28	■■□□□ 1
TMEM259-208	ENST00000592052	TMPRSS11A	Q6ZMR5	421 aa		21.28	■■□□□ 1
TMEM259-208	ENST00000592052	MRPL37	Q9BZE1	423 aa	Known RBP	21.28	■■□□□ 1
TMEM259-208	ENST00000592052	DUSP21	Q9H596	190 aa		21.28	■■□□□ 1
TMEM259-208	ENST00000592052	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	21.28	■■□□□ 1
TMEM259-208	ENST00000592052	CAB39	Q9Y376	341 aa	Predicted RBP	21.28	■■□□□ 1
TMEM259-208	ENST00000592052	APC	P25054	2843 aa		21.27	■■□□□ 1
TMEM259-208	ENST00000592052	LOC110117498-PIK3R3	F6TDL0	507 aa		21.27	■■□□□ 1
TMEM259-208	ENST00000592052	SRSF10	O75494	262 aa	Known RBP	21.27	■■□□□ 1
TMEM259-208	ENST00000592052	ATE1	O95260	518 aa		21.27	■■□□□ 1
TMEM259-208	ENST00000592052	EFNB3	Q15768	340 aa		21.27	■■□□□ 1
TMEM259-208	ENST00000592052	FBXW12	Q6X9E4	464 aa		21.27	■■□□□ 1
TMEM259-208	ENST00000592052	SYT3	Q9BQG1	590 aa		21.27	■■□□□ 1
TMEM259-208	ENST00000592052	MOB1A	Q9H8S9	216 aa		21.27	■■□□□ 1
TMEM259-208	ENST00000592052	ISG20L2	Q9H9L3	353 aa	Known RBP	21.27	■■□□□ 1
TMEM259-208	ENST00000592052	EDAR	Q9UNE0	448 aa		21.27	■■□□□ 1
TMEM259-208	ENST00000592052	GTF2A1L	Q9UNN4	478 aa		21.27	■■□□□ 1
TMEM259-208	ENST00000592052	SNX5	Q9Y5X3	404 aa		21.27	■■□□□ 1
TMEM259-208	ENST00000592052	ABCA12	Q86UK0	2595 aa		21.27	■□□□□ 0.99
TMEM259-208	ENST00000592052		B9A039	149 aa		21.26	■□□□□ 0.99
TMEM259-208	ENST00000592052	XRCC2	O43543	280 aa		21.26	■□□□□ 0.99
TMEM259-208	ENST00000592052	PNP	P00491	289 aa		21.26	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms