RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PGA4P0DJD7 388 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 PGA3P0DJD8 388 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 PAICSP22234 425 aaKnown RBP8.02□□□□□ -1.13
BRCA1-226ENST00000591534 CCNOP22674 350 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 CENPAP49450 140 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 CXCR4P61073 352 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 PRKCDQ05655 676 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 AVPI1Q5T686 147 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 SLC27A4Q6P1M0 643 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 RASSF6Q6ZTQ3 369 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 USP51Q70EK9 711 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 ZER1Q7Z7L7 766 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 OR1J1Q8NGS3 322 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 NRG4Q8WWG1 115 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 CYGBQ8WWM9 190 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 LIPHQ8WWY8 451 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 CCL17Q92583 94 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 RFKQ969G6 155 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 BPIFA2Q96DR5 249 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 PLEKHA8Q96JA3 519 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 GPA33Q99795 319 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 ZNF426Q9BUY5 554 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 OR51B6Q9H340 312 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 SIAEQ9HAT2 523 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 SCN3BQ9NY72 215 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 TAS2R5Q9NYW4 299 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 FBLN5Q9UBX5 448 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 ZDHHC8Q9ULC8 765 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 WIPI2Q9Y4P8 454 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 GMPPBQ9Y5P6 360 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 PPIAL4EA0A075B759 164 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 PPIAL4CA0A0B4J2A2 164 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 ISPDA4D126 451 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 MAGEA13PA6NCF6 341 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 EFCAB9A8MZ26 197 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 PPIAL4DF5H284 164 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 BLOC1S5-TXNDC5H3BN57 136 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 H3BSA7 217 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 SOCS2O14508 198 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 WNT9BO14905 357 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 FOXH1O75593 365 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 IGHV2-5P01817 119 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 PPIAL4FP0DN26 164 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 CCL2P13500 99 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 EGR1P18146 543 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 NAT1P18440 290 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 MYF6P23409 242 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 TNFSF4P23510 183 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 STOMP27105 288 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 SLC6A6P31641 620 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 GDI2P50395 445 aaKnown RBP8.01□□□□□ -1.13
BRCA1-226ENST00000591534 AQP4P55087 323 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 PCBD1P61457 104 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 TMED1Q13445 227 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 TSTQ16762 297 aaKnown RBP8.01□□□□□ -1.13
BRCA1-226ENST00000591534 SLC36A3Q495N2 470 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 RBM48Q5RL73 367 aaKnown RBP8.01□□□□□ -1.13
BRCA1-226ENST00000591534 FAM205BPQ63HN1 556 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 OAFQ86UD1 273 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 OR2T33Q8NG76 320 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 OR8J1Q8NGP2 316 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 FNDC8Q8TC99 324 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 MCHR2Q969V1 340 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 SGTBQ96EQ0 304 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 MRPL48Q96GC5 212 aaKnown RBP8.01□□□□□ -1.13
BRCA1-226ENST00000591534 PRSS27Q9BQR3 290 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 SMURF2Q9HAU4 748 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 ELOVL3Q9HB03 270 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 FAM118AQ9NWS6 357 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 SCOCQ9UIL1 159 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 TPRKBQ9Y3C4 175 aa8.01□□□□□ -1.13
BRCA1-226ENST00000591534 A0A087WUU8 490 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 UNC119BA6NIH7 251 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 KPNA4O00629 521 aaPredicted RBP8□□□□□ -1.13
BRCA1-226ENST00000591534 FFAR1O14842 300 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 SPRY3O43610 288 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 AHCYL1O43865 530 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 DIRAS1O95057 198 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 NDUFB2O95178 105 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 ASAH2BP0C7U1 165 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 IFI30P13284 250 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 ADRA2CP18825 462 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 TUBG1P23258 451 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 YAP1P46937 504 aaKnown RBP8□□□□□ -1.13
BRCA1-226ENST00000591534 GSSP48637 474 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 BLVRAP53004 296 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 CRISP1P54107 249 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 MRPS34P82930 218 aaKnown RBP8□□□□□ -1.13
BRCA1-226ENST00000591534 MELKQ14680 651 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 HIST3H3Q16695 136 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 AWAT1Q58HT5 328 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 PABPC1L2AQ5JQF8 200 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 ARMC4Q5T2S8 1044 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 MBNL2Q5VZF2 373 aaKnown RBP8□□□□□ -1.13
BRCA1-226ENST00000591534 GPR139Q6DWJ6 353 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 ZNF770Q6IQ21 691 aaPredicted RBP8□□□□□ -1.13
BRCA1-226ENST00000591534 PGBD2Q6P3X8 592 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 NKAIN4Q8IVV8 208 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 LRRC18Q8N456 261 aa8□□□□□ -1.13
BRCA1-226ENST00000591534 KLHL36Q8N4N3 616 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms