RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 KRT77Q7Z794 578 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 SLC35F2Q8IXU6 374 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 ASB17Q8WXJ9 295 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 APOL4Q9BPW4 351 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 SP140LQ9H930 580 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 ADGRL4Q9HBW9 690 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 CYSLTR2Q9NS75 346 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 NKX1-2Q9UD57 310 aaPredicted RBP18.22■□□□□ 0.51
ATG4D-212ENST00000590096 CGGBP1Q9UFW8 167 aaPredicted RBP18.22■□□□□ 0.51
ATG4D-212ENST00000590096 KLHDC2Q9Y2U9 406 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 N6AMT1Q9Y5N5 214 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 ITPR3Q14573 2671 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 ZFHX3Q15911 3703 aa18.22■□□□□ 0.51
ATG4D-212ENST00000590096 MAP1AP78559 2803 aaPredicted RBP18.21■□□□□ 0.51
ATG4D-212ENST00000590096 DLGAP1O14490 977 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 PHYHO14832 338 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 ANXA2P07355 339 aaKnown RBP18.21■□□□□ 0.51
ATG4D-212ENST00000590096 SBK2P0C263 348 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 RAC2P15153 192 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 LIPAP38571 399 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 HLXQ14774 488 aaPredicted RBP18.21■□□□□ 0.51
ATG4D-212ENST00000590096 OCLNQ16625 522 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 ZMAT1Q5H9K5 638 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 SLC25A30Q5SVS4 291 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 CLEC2AQ6UVW9 174 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 CYGBQ8WWM9 190 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 HAVCR1Q96D42 359 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 RNPEPL1Q9HAU8 725 aa18.21■□□□□ 0.51
ATG4D-212ENST00000590096 PURGQ9UJV8 347 aaKnown RBP18.21■□□□□ 0.51
ATG4D-212ENST00000590096 MED13LQ71F56 2210 aa18.21■□□□□ 0.5
ATG4D-212ENST00000590096 C17orf100A8MU93 164 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 ZNF670-ZNF695F2Z2N8 137 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 ENTPD6O75354 484 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 LY6HO94772 140 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 SLC2A1P11166 492 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 KITLGP21583 273 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 ZNF81P51508 661 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 DSCR9P59020 149 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 TTC23Q5W5X9 447 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 LRRN1Q6UXK5 716 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 ENTHD1Q8IYW4 607 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 Q96MT0 163 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 MROQ9BYG7 248 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 NIPAL2Q9H841 368 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 MYOZ1Q9NP98 299 aaPredicted RBP18.2■□□□□ 0.5
ATG4D-212ENST00000590096 CLN6Q9NWW5 311 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 COPS3Q9UNS2 423 aa18.2■□□□□ 0.5
ATG4D-212ENST00000590096 TBX1O43435 398 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 CSF3P09919 207 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 SELEP16581 610 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 MMP15P51511 669 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 PCGF3Q3KNV8 242 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 SNAI3Q3KNW1 292 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 TMEM255AQ5JRV8 349 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 DEGS2Q6QHC5 323 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 MRPL21Q7Z2W9 205 aaKnown RBP18.19■□□□□ 0.5
ATG4D-212ENST00000590096 DHRSXQ8N5I4 330 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 ZNF525Q8N782 197 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 IKZF2Q9UKS7 526 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 LRP12Q9Y561 859 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 VPS13CQ709C8 3753 aa18.19■□□□□ 0.5
ATG4D-212ENST00000590096 XRCC2O43543 280 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 GABRB1P18505 474 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 MTNR1AP48039 350 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 ZNF121P58317 390 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-212ENST00000590096 CXCR4P61073 352 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 GK2Q14410 553 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-212ENST00000590096 CARTPTQ16568 116 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 OR2T2Q6IF00 324 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 ZNF322Q6U7Q0 402 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-212ENST00000590096 USP51Q70EK9 711 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 FAM57BQ71RH2 274 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 PGAP1Q75T13 922 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 RHOXF1Q8NHV9 184 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 GTF3AQ92664 365 aaKnown RBP18.18■□□□□ 0.5
ATG4D-212ENST00000590096 RHNO1Q9BSD3 238 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 TTTY10Q9BZA0 68 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 BRD7Q9NPI1 651 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 AASSQ9UDR5 926 aa18.18■□□□□ 0.5
ATG4D-212ENST00000590096 PSMD9O00233 223 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 TPD52L2O43399 206 aaKnown RBP18.17■□□□□ 0.5
ATG4D-212ENST00000590096 SPRY3O43610 288 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 ZNF254O75437 659 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 APOL3O95236 402 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 OR2T7P0C7T2 308 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 DAOP14920 347 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 PDLIM4P50479 330 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 RIDAP52758 137 aaKnown RBP18.17■□□□□ 0.5
ATG4D-212ENST00000590096 IL5RAQ01344 420 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 TIGD6Q17RP2 521 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 GLYATL3Q5SZD4 288 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 ZNF679Q8IYX0 411 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 OR5AS1Q8N127 324 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 SETD9Q8NE22 299 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 OR10H4Q8NGA5 316 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 OR52H1Q8NGJ2 320 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 OR2T27Q8NH04 317 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 OR2AE1Q8NHA4 323 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 FAM168AQ92567 244 aa18.17■□□□□ 0.5
ATG4D-212ENST00000590096 RNFT2Q96EX2 444 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms