RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 RENP00797 406 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 IGHV4-38-2P0DP08 117 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 RRM2P31350 389 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 TRAP1Q12931 704 aaKnown RBP15.06■□□□□ 0
H3F3B-209ENST00000589949 ESCO2Q56NI9 601 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 ARMCX4Q5H9R4 360 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 ZNF362Q5T0B9 420 aaPredicted RBP15.06■□□□□ 0
H3F3B-209ENST00000589949 SLC27A4Q6P1M0 643 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 PGBD2Q6P3X8 592 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 PGM2L1Q6PCE3 622 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 LYPD2Q6UXB3 125 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 ZNF620Q6ZNG0 422 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 DOK3Q7L591 496 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 KLBQ86Z14 1044 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 C19orf18Q8NEA5 215 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 OR52E2Q8NGJ4 325 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 CDRT15Q96T59 188 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 KRCC1Q9NPI7 259 aaPredicted RBP15.06■□□□□ 0
H3F3B-209ENST00000589949 MAGEL2Q9UJ55 1249 aa15.06■□□□□ 0
H3F3B-209ENST00000589949 PKD1L1Q8TDX9 2849 aa15.05■□□□□ 0
H3F3B-209ENST00000589949 GMNNO75496 209 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 PYCR1P32322 319 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 SRP9P49458 86 aaKnown RBP15.05■□□□□ -0
H3F3B-209ENST00000589949 SMIM11AP58511 58 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.05■□□□□ -0
H3F3B-209ENST00000589949 MPPED2Q15777 294 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 CLEC12AQ5QGZ9 265 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 CCDC121Q6ZUS5 278 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 PGAM4Q8N0Y7 254 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 MUC20Q8N307 709 aaPredicted RBP15.05■□□□□ -0
H3F3B-209ENST00000589949 CYB561A3Q8NBI2 242 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 OR8D4Q8NGM9 314 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 ATF6BQ99941 703 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 SSBP3Q9BWW4 388 aaPredicted RBP15.05■□□□□ -0
H3F3B-209ENST00000589949 NTN4Q9HB63 628 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 IL1RAPQ9NPH3 570 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 TMEM100Q9NV29 134 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 LRCH1Q9Y2L9 728 aa15.05■□□□□ -0
H3F3B-209ENST00000589949 FABP3P05413 133 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 RPS2P15880 293 aaKnown RBP15.04■□□□□ -0
H3F3B-209ENST00000589949 GATA4P43694 442 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 RAD23AP54725 363 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 TSPAN31Q12999 210 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 ZNF181Q2M3W8 571 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 SNAI3Q3KNW1 292 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 ZNF404Q494X3 552 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 OR9Q2Q8NGE9 314 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 GNPDA2Q8TDQ7 276 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 SLCO4A1Q96BD0 722 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 NSMCE2Q96MF7 247 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 BTBD10Q9BSF8 475 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 MRI1Q9BV20 369 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 HCAR1Q9BXC0 346 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 DDX28Q9NUL7 540 aaKnown RBP15.04■□□□□ -0
H3F3B-209ENST00000589949 OR5V1Q9UGF6 321 aa15.04■□□□□ -0
H3F3B-209ENST00000589949 MEGF8Q7Z7M0 2845 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 IGHV2-70DA0A0C4DH43 119 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 TVP23AA6NH52 213 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 IFNL4K9M1U5 179 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 BHLHE40O14503 412 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 IDH3BO43837 385 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 LCATP04180 440 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 HKR1P10072 659 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 PRTN3P24158 256 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 NOS3P29474 1203 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 BNIP1Q12981 228 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 SAMD4BQ5PRF9 694 aaKnown RBP15.03■□□□□ -0
H3F3B-209ENST00000589949 PRAMEF6Q5VXH4 476 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 ZNF770Q6IQ21 691 aaPredicted RBP15.03■□□□□ -0
H3F3B-209ENST00000589949 ZNF841Q6ZN19 808 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 ZDHHC21Q8IVQ6 265 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 OR51L1Q8NGJ5 315 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 OR2AJ1Q8NGZ0 328 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 CDADC1Q9BWV3 514 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 PCDHGB1Q9Y5G3 927 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 LYVE1Q9Y5Y7 322 aa15.03■□□□□ -0
H3F3B-209ENST00000589949 MDFIC2A0A1B0GVS7 189 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 SPRY1O43609 319 aaPredicted RBP15.02■□□□□ -0
H3F3B-209ENST00000589949 FAM20BO75063 409 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 FSTL3O95633 263 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 HLA-DQA2P01906 255 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 ATP6V1B2P21281 511 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 HMGA2P52926 109 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 GNB2P62879 340 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 ZNF92Q03936 586 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 PPP1R8Q12972 351 aaKnown RBP15.02■□□□□ -0
H3F3B-209ENST00000589949 ECH1Q13011 328 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 SLC36A3Q495N2 470 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 OR4C15Q8NGM1 316 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 OR2AE1Q8NHA4 323 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 Q8TCH9 128 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 RAB40AQ8WXH6 277 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 MCUR1Q96AQ8 359 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 UPRTQ96BW1 309 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 NEIL1Q96FI4 390 aaPredicted RBP15.02■□□□□ -0
H3F3B-209ENST00000589949 UFSP2Q9NUQ7 469 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 MIOXQ9UGB7 285 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 TAGLN3Q9UI15 199 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 TMCC3Q9ULS5 477 aa15.02■□□□□ -0
H3F3B-209ENST00000589949 CDH10Q9Y6N8 788 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms