RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 TBX1O43435 398 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 GPRIN2O60269 458 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 NGFP01138 241 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 MT-ND5P03915 603 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 ADRA2AP08913 450 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 LIMS3P0CW19 117 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 LIMS4P0CW20 117 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 SLC2A1P11166 492 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 C21orf33P30042 268 aaPredicted RBP11.74□□□□□ -0.53
VMP1-210ENST00000589823 THBS4P35443 961 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 OR12D2P58182 307 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 GABARAPL2P60520 117 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 MVKQ03426 396 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 RGS7BPQ6MZT1 257 aaPredicted RBP11.74□□□□□ -0.53
VMP1-210ENST00000589823 ZNF544Q6NX49 715 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 COLCA1Q6ZS62 124 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 FAM57BQ71RH2 274 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 OR52H1Q8NGJ2 320 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 LILRB1Q8NHL6 650 aaPredicted RBP11.74□□□□□ -0.53
VMP1-210ENST00000589823 NEUROG1Q92886 237 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 FBXW5Q969U6 566 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 ZNF442Q9H7R0 627 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 MOB1AQ9H8S9 216 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 UBTD1Q9HAC8 227 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 ACOXLQ9NUZ1 547 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 ERVK-18Q9QC07 812 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 CMAHPQ9Y471 501 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 R4GMQ9 66 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 PKDREJQ9NTG1 2253 aa11.74□□□□□ -0.53
VMP1-210ENST00000589823 LOC110117498-PIK3R3F6TDL0 507 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 H3BSA7 217 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 ATE1O95260 518 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 HTR1AP08908 422 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 GCH1P30793 250 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 APOBEC3AP31941 199 aaPredicted RBP11.73□□□□□ -0.53
VMP1-210ENST00000589823 FABP6P51161 128 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 MMP16P51512 607 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 GBX2P52951 348 aaPredicted RBP11.73□□□□□ -0.53
VMP1-210ENST00000589823 SELENOVP59797 346 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 MRPL28Q13084 256 aaKnown RBP11.73□□□□□ -0.53
VMP1-210ENST00000589823 SNAI3Q3KNW1 292 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 ZNF718Q3SXZ3 478 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 SPATA46Q5T0L3 261 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 RNLSQ5VYX0 342 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 PRSS48Q7RTY5 328 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 OR52N1Q8NH53 320 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 SLC25A40Q8TBP6 338 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 HAVCR2Q8TDQ0 301 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 SPRYD4Q8WW59 207 aaPredicted RBP11.73□□□□□ -0.53
VMP1-210ENST00000589823 SGCDQ92629 289 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 DHRS9Q9BPW9 319 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 ZNF649Q9BS31 505 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 CDCA4Q9BXL8 241 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 OR10A2Q9H208 303 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 ISG20L2Q9H9L3 353 aaKnown RBP11.73□□□□□ -0.53
VMP1-210ENST00000589823 FAIMQ9NVQ4 179 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 FAM206AQ9NX38 181 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 PTTG3PQ9NZH4 202 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 CLEC2DQ9UHP7 191 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 SNX5Q9Y5X3 404 aa11.73□□□□□ -0.53
VMP1-210ENST00000589823 HEATR1Q9H583 2144 aaKnown RBP11.72□□□□□ -0.53
VMP1-210ENST00000589823 A0A1W2PPR1 153 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 TMEM129A0AVI4 362 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 XRCC2O43543 280 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 MRPS14O60783 128 aaKnown RBP11.72□□□□□ -0.53
VMP1-210ENST00000589823 MT-ND2P03891 347 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 OR4A8P0C604 315 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 PSMB10P40306 273 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 CHN2P52757 468 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 ERVS71-1P61550 626 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 MFGE8Q08431 387 aaPredicted RBP11.72□□□□□ -0.53
VMP1-210ENST00000589823 ADIPOQQ15848 244 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 TIGD6Q17RP2 521 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 GFOD2Q3B7J2 385 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 BCL2L15Q5TBC7 163 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 OR2G6Q5TZ20 316 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 PRSS45Q7RTY3 260 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 FBXL14Q8N1E6 418 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 ZNF611Q8N823 705 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 SYNPRQ8TBG9 265 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 TMEM171Q8WVE6 324 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 RORBQ92753 470 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 PELI1Q96FA3 418 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 MARS2Q96GW9 593 aaKnown RBP11.72□□□□□ -0.53
VMP1-210ENST00000589823 SIGLEC11Q96RL6 698 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 MND1Q9BWT6 205 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 OR2J1Q9GZK6 312 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 PBOV1Q9GZY1 135 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 OPA3Q9H6K4 179 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 NUFIP1Q9UHK0 495 aaKnown RBP11.72□□□□□ -0.53
VMP1-210ENST00000589823 DUSP13Q9UII6 198 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 OR52A1Q9UKL2 312 aa11.72□□□□□ -0.53
VMP1-210ENST00000589823 SRSF10O75494 262 aaKnown RBP11.71□□□□□ -0.53
VMP1-210ENST00000589823 TNFAIP8O95379 198 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 PNPP00491 289 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 CFL1P23528 166 aaKnown RBP11.71□□□□□ -0.53
VMP1-210ENST00000589823 WNT4P56705 351 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 KCTD21Q4G0X4 260 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 GLYATL3Q5SZD4 288 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 MRPL21Q7Z2W9 205 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms