RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 RAD23AP54725 363 aa17.79■□□□□ 0.44
NEDD4L-225ENST00000589054 SLC35F1Q5T1Q4 408 aa17.79■□□□□ 0.44
NEDD4L-225ENST00000589054 LYPD4Q6UWN0 246 aa17.79■□□□□ 0.44
NEDD4L-225ENST00000589054 PARP8Q8N3A8 854 aa17.79■□□□□ 0.44
NEDD4L-225ENST00000589054 SLCO4A1Q96BD0 722 aa17.79■□□□□ 0.44
NEDD4L-225ENST00000589054 PYURFQ96I23 114 aa17.79■□□□□ 0.44
NEDD4L-225ENST00000589054 MS4A7Q9GZW8 240 aaPredicted RBP17.79■□□□□ 0.44
NEDD4L-225ENST00000589054 SPAG4Q9NPE6 437 aa17.79■□□□□ 0.44
NEDD4L-225ENST00000589054 SAMD4AQ9UPU9 718 aaKnown RBP17.79■□□□□ 0.44
NEDD4L-225ENST00000589054 KIR2DS1A0A191URI9 304 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 C22orf46C9J442 243 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 IFNL4K9M1U5 179 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 NDUFAB1O14561 156 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 FAM20BO75063 409 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 GADD45GO95257 159 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 RNASE1P07998 156 aaKnown RBP17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 GATA4P43694 442 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 GNB2P62879 340 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 SPIBQ01892 262 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 TRAP1Q12931 704 aaKnown RBP17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 FOXL1Q12952 345 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 PRR31Q5SQ13 230 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 ZNF362Q5T0B9 420 aaPredicted RBP17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 C9orf139Q6ZV77 190 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 FITM2Q8N6M3 262 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 NEIL1Q96FI4 390 aaPredicted RBP17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 PITX2Q99697 317 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 IFT27Q9BW83 186 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 UFSP2Q9NUQ7 469 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 MIOXQ9UGB7 285 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 CD300AQ9UGN4 299 aa17.78■□□□□ 0.44
NEDD4L-225ENST00000589054 TRAV40A0A0B4J280 105 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 FCN3O75636 299 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 SLC6A6P31641 620 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 PYCR1P32322 319 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 SNAI3Q3KNW1 292 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 WDR25Q64LD2 544 aaPredicted RBP17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 PGM2L1Q6PCE3 622 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 DNM1P34Q6PK57 102 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 BRD3OSQ6XYD6 125 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 CMTM5Q96DZ9 223 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 ATF6BQ99941 703 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 EGLN3Q9H6Z9 239 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 UNKLQ9H9P5 680 aaKnown RBP17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 TMCC3Q9ULS5 477 aa17.77■□□□□ 0.44
NEDD4L-225ENST00000589054 OR10H3O60404 316 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 FSTL3O95633 263 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 RENP00797 406 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 LCATP04180 440 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 PPIAL4GP0DN37 164 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 CD200P41217 278 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 PITPNBP48739 271 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 KRT72Q14CN4 511 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 PGBD2Q6P3X8 592 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 LRRN1Q6UXK5 716 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 ZNF620Q6ZNG0 422 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 CYB561A3Q8NBI2 242 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 Q8TCH9 128 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 NUDT16L1Q9BRJ7 211 aaKnown RBP17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 HCAR1Q9BXC0 346 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 CTSZQ9UBR2 303 aa17.76■□□□□ 0.43
NEDD4L-225ENST00000589054 TVP23AA6NH52 213 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 CLDN34H7C241 214 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 TNFRSF13BO14836 293 aaPredicted RBP17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 CA6P23280 308 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 PRDX6P30041 224 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 RRM2P31350 389 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 PSMB10P40306 273 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 ZNF92Q03936 586 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 DEFB112Q30KQ8 113 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 SHISA2Q6UWI4 295 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 OR8D4Q8NGM9 314 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 OR2AE1Q8NHA4 323 aa17.75■□□□□ 0.43
NEDD4L-225ENST00000589054 ARPC2O15144 300 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 HSD17B1P14061 328 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 MDKP21741 143 aaPredicted RBP17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 OMGP23515 440 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 FGF12P61328 243 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 SFRP4Q6FHJ7 346 aaPredicted RBP17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 BTNL3Q6UXE8 466 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 OR8B3Q8NGG8 313 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 OR51L1Q8NGJ5 315 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 OR2AJ1Q8NGZ0 328 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 OR8B2Q96RD0 313 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 BTBD10Q9BSF8 475 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 ZNF696Q9H7X3 374 aa17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 KRCC1Q9NPI7 259 aaPredicted RBP17.74■□□□□ 0.43
NEDD4L-225ENST00000589054 CD300LBA8K4G0 201 aa17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 BHLHE40O14503 412 aa17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 HOXA3O43365 443 aaPredicted RBP17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 HLA-DQA2P01906 255 aa17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 CPT2P23786 658 aa17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 SRSF4Q08170 494 aaKnown RBP17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 TSPAN31Q12999 210 aa17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 ECH1Q13011 328 aa17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 SLC36A3Q495N2 470 aa17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 RUSC1-AS1Q66K80 236 aa17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 DCDC5Q6ZRR9 648 aa17.73■□□□□ 0.43
NEDD4L-225ENST00000589054 PGAP1Q75T13 922 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms