RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 RBMS2Q15434 407 aaKnown RBP13.5□□□□□ -0.25
MBD1-217ENST00000588937 LINC00303Q3SY05 128 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 CDCP2Q5VXM1 449 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 B3GNTL1Q67FW5 361 aaPredicted RBP13.5□□□□□ -0.25
MBD1-217ENST00000588937 ZNF529Q6P280 563 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 ZNF782Q6ZMW2 699 aaPredicted RBP13.5□□□□□ -0.25
MBD1-217ENST00000588937 DOK3Q7L591 496 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 ZNF627Q7L945 461 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 COMMD2Q86X83 199 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 CDH26Q8IXH8 852 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 TMEM123Q8N131 208 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 BEST3Q8N1M1 668 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 ZNF283Q8N7M2 679 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 PRSS33Q8NF86 280 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 ADAT3Q96EY9 351 aaPredicted RBP13.5□□□□□ -0.25
MBD1-217ENST00000588937 UCN2Q96RP3 112 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 CDC6Q99741 560 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 ZNF416Q9BWM5 594 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 FAM117AQ9C073 453 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 IRF2BPLQ9H1B7 796 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 KCNK15Q9H427 330 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 ZNF107Q9UII5 783 aaPredicted RBP13.5□□□□□ -0.25
MBD1-217ENST00000588937 SLC5A6Q9Y289 635 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 BOLA1Q9Y3E2 137 aa13.5□□□□□ -0.25
MBD1-217ENST00000588937 IGHV3-15A0A0B4J1V0 119 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 FABP7O15540 132 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 DHHO43323 396 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 APOC1P02654 83 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 GTF2F2P13984 249 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 CCL1P22362 96 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 ENPP1P22413 925 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 VEGFCP49767 419 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 TAS2R19P59542 299 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 GLDNQ6ZMI3 551 aaPredicted RBP13.49□□□□□ -0.25
MBD1-217ENST00000588937 ABHD12BQ7Z5M8 362 aaPredicted RBP13.49□□□□□ -0.25
MBD1-217ENST00000588937 BIVMQ86UB2 503 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 OR8B12Q8NGG6 310 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 GRPEL2Q8TAA5 225 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 ZNF385AQ96PM9 386 aaKnown RBP13.49□□□□□ -0.25
MBD1-217ENST00000588937 CNTD2Q9H8S5 307 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 PLSCR3Q9NRY6 295 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 FLVCR2Q9UPI3 526 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 PCDHGA1Q9Y5H4 931 aa13.49□□□□□ -0.25
MBD1-217ENST00000588937 KIAA1549Q9HCM3 1950 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 MEIKINA0A087WXM9 373 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 SNRPGP15A8MWD9 76 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 CNR1P21554 472 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 NBL1P41271 181 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 CARD18P57730 90 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 OC90Q02509 493 aaPredicted RBP13.48□□□□□ -0.25
MBD1-217ENST00000588937 SPEM2Q0P670 501 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 PMPCAQ10713 525 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 TMEM53Q6P2H8 277 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 YRDCQ86U90 279 aaKnown RBP13.48□□□□□ -0.25
MBD1-217ENST00000588937 C20orf196Q8IYI0 205 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 TMEM229BQ8NBD8 167 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 BEST4Q8NFU0 473 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 OR52N4Q8NGI2 321 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 OR4D6Q8NGJ1 314 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 OR4C16Q8NGL9 310 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 FAM46BQ96A09 425 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 SFXN2Q96NB2 322 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 RBM24Q9BX46 236 aaKnown RBP13.48□□□□□ -0.25
MBD1-217ENST00000588937 ULBP2Q9BZM5 246 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 FOXD3Q9UJU5 478 aaPredicted RBP13.48□□□□□ -0.25
MBD1-217ENST00000588937 RHBDD3Q9Y3P4 386 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 PHF3Q92576 2039 aaKnown RBP13.48□□□□□ -0.25
MBD1-217ENST00000588937 LINC01387J3KSC0 135 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 MT-CO3P00414 261 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 CPN1P15169 458 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 DLSTP36957 453 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 CASRP41180 1078 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 FAAP20Q6NZ36 180 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 CCDC54Q8NEL0 328 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 PGAM5Q96HS1 289 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 THOC3Q96J01 351 aaKnown RBP13.48□□□□□ -0.25
MBD1-217ENST00000588937 SRXN1Q9BYN0 137 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 BEX1Q9HBH7 125 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 ZFP64Q9NPA5 681 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 GPR84Q9NQS5 396 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 ABI3Q9P2A4 366 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 FBLN5Q9UBX5 448 aa13.48□□□□□ -0.25
MBD1-217ENST00000588937 BOKQ9UMX3 212 aaPredicted RBP13.48□□□□□ -0.25
MBD1-217ENST00000588937 A0A0G2JMM0 328 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 A0A1W2PPB8 328 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 A0A1W2PRS3 328 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 PMS2P1A4D2B8 440 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 LRRC3CA6NJW4 275 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 KIR3DP1A8MWS1 328 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 SMLR1H3BR10 107 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 SMAD9O15198 467 aaKnown RBP13.47□□□□□ -0.25
MBD1-217ENST00000588937 CREBL2O60519 120 aaPredicted RBP13.47□□□□□ -0.25
MBD1-217ENST00000588937 TRAPPC6AO75865 159 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 HPXP02790 462 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 S100A1P23297 94 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 ZNF93P35789 620 aaPredicted RBP13.47□□□□□ -0.25
MBD1-217ENST00000588937 GSK3AP49840 483 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 SELENOPP49908 381 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 HIST1H3AP68431 136 aa13.47□□□□□ -0.25
MBD1-217ENST00000588937 GUCA2AQ02747 115 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms