RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ZNF250P15622 560 aa16.84■□□□□ 0.29
CIRBP-220ENST00000588917 CX3CR1P49238 355 aa16.84■□□□□ 0.29
CIRBP-220ENST00000588917 EFNB3Q15768 340 aa16.84■□□□□ 0.29
CIRBP-220ENST00000588917 SPNS3Q6ZMD2 512 aa16.84■□□□□ 0.29
CIRBP-220ENST00000588917 BPIFB6Q8NFQ5 453 aa16.84■□□□□ 0.29
CIRBP-220ENST00000588917 OR52I1Q8NGK6 324 aa16.84■□□□□ 0.29
CIRBP-220ENST00000588917 MRPL24Q96A35 216 aaKnown RBP16.84■□□□□ 0.29
CIRBP-220ENST00000588917 MARS2Q96GW9 593 aaKnown RBP16.84■□□□□ 0.29
CIRBP-220ENST00000588917 DOK1Q99704 481 aa16.84■□□□□ 0.29
CIRBP-220ENST00000588917 CBLN4Q9NTU7 201 aa16.84■□□□□ 0.29
CIRBP-220ENST00000588917 CHCHD3Q9NX63 227 aaKnown RBP16.84■□□□□ 0.29
CIRBP-220ENST00000588917 LRP12Q9Y561 859 aa16.84■□□□□ 0.29
CIRBP-220ENST00000588917 PMF1-BGLAPU3KQ54 211 aa16.84■□□□□ 0.29
CIRBP-220ENST00000588917 METTL15A6NJ78 407 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 GPRIN2O60269 458 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 IGHA1P01876 353 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 RAF1P04049 648 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 PIPP12273 146 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-220ENST00000588917 ACTA2P62736 377 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 ACTG2P63267 376 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 ZNF829Q3KNS6 432 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-220ENST00000588917 MBNL2Q5VZF2 373 aaKnown RBP16.83■□□□□ 0.28
CIRBP-220ENST00000588917 DTX2Q86UW9 622 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 NAA40Q86UY6 237 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 SLC25A40Q8TBP6 338 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 GGHQ92820 318 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 TMEM80Q96HE8 168 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 CNBD2Q96M20 576 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 OR2J1Q9GZK6 312 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 DUSP13Q9UII6 198 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 LAMP3Q9UQV4 416 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 TPRKBQ9Y3C4 175 aa16.83■□□□□ 0.28
CIRBP-220ENST00000588917 TMEM269A0A1B0GVZ9 245 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 FAM20BO75063 409 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 ATE1O95260 518 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 ANXA2P07355 339 aaKnown RBP16.82■□□□□ 0.28
CIRBP-220ENST00000588917 CCDC159P0C7I6 412 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 DNASE1P24855 282 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 MMP16P51512 607 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 KLF3P57682 345 aaPredicted RBP16.82■□□□□ 0.28
CIRBP-220ENST00000588917 GALEQ14376 348 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 PAMR1Q6UXH9 720 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 RFPL4BQ6ZWI9 263 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 FAM220AQ7Z4H9 259 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 YIPF7Q8N8F6 280 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 KLF14Q8TD94 323 aaPredicted RBP16.82■□□□□ 0.28
CIRBP-220ENST00000588917 HAVCR2Q8TDQ0 301 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 NINJ1Q92982 152 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 JAM3Q9BX67 310 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 CXorf56Q9H5V9 222 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 OPA3Q9H6K4 179 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 PSORS1C1Q9UIG5 152 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 ST6GALNAC2Q9UJ37 374 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 DIMT1Q9UNQ2 313 aaKnown RBP16.82■□□□□ 0.28
CIRBP-220ENST00000588917 MYRFQ9Y2G1 1151 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 EXOSC1Q9Y3B2 195 aaKnown RBP16.82■□□□□ 0.28
CIRBP-220ENST00000588917 PRR14LQ5THK1 2151 aa16.82■□□□□ 0.28
CIRBP-220ENST00000588917 HEATR1Q9H583 2144 aaKnown RBP16.82■□□□□ 0.28
CIRBP-220ENST00000588917 MTORP42345 2549 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 PSMD9O00233 223 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 XRCC2O43543 280 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 IGHV3-13P01766 116 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 MT-ND5P03915 603 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 RAC2P15153 192 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 SELEP16581 610 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 MYL12AP19105 171 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 CFL1P23528 166 aaKnown RBP16.81■□□□□ 0.28
CIRBP-220ENST00000588917 LIPAP38571 399 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 ZNF121P58317 390 aaPredicted RBP16.81■□□□□ 0.28
CIRBP-220ENST00000588917 PSMA6P60900 246 aaKnown RBP16.81■□□□□ 0.28
CIRBP-220ENST00000588917 SNRPD2P62316 118 aaKnown RBP16.81■□□□□ 0.28
CIRBP-220ENST00000588917 ZNF85Q03923 595 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 SWI5Q1ZZU3 235 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 CDONQ4KMG0 1287 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 ZNF684Q5T5D7 378 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 FBXW12Q6X9E4 464 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 STX19Q8N4C7 294 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 ZNF540Q8NDQ6 660 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 MYDGFQ969H8 173 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 ITFG2Q969R8 447 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 HAVCR1Q96D42 359 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 PGAM5Q96HS1 289 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 CCL19Q99731 98 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 TRAF4Q9BUZ4 470 aaPredicted RBP16.81■□□□□ 0.28
CIRBP-220ENST00000588917 OR10A2Q9H208 303 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 MS4A5Q9H3V2 200 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 RGCCQ9H4X1 137 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 MRM2Q9UI43 246 aaKnown RBP16.81■□□□□ 0.28
CIRBP-220ENST00000588917 ZNF391Q9UJN7 358 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 N6AMT1Q9Y5N5 214 aa16.81■□□□□ 0.28
CIRBP-220ENST00000588917 IGLV3-9A0A075B6K5 115 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 SOD3P08294 240 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 ERVS71-1P61550 626 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 ST3GAL4Q11206 333 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 MRPL28Q13084 256 aaKnown RBP16.8■□□□□ 0.28
CIRBP-220ENST00000588917 RBM48Q5RL73 367 aaKnown RBP16.8■□□□□ 0.28
CIRBP-220ENST00000588917 LIPNQ5VXI9 398 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 LAIR2Q6ISS4 152 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 TMPRSS11AQ6ZMR5 421 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 LHFPL3Q86UP9 236 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms