RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SLC25A38Q96DW6 304 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 CMTM3Q96MX0 182 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 KCNJ15Q99712 375 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 MRI1Q9BV20 369 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 C11orf54Q9H0W9 315 aaPredicted RBP7.72□□□□□ -1.17
SMAD4-206ENST00000588860 DEFB127Q9H1M4 99 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 LDAHQ9H6V9 325 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 OR5V1Q9UGF6 321 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 STEAP1Q9UHE8 339 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 NUFIP1Q9UHK0 495 aaKnown RBP7.72□□□□□ -1.17
SMAD4-206ENST00000588860 MCTS1Q9ULC4 181 aaKnown RBP7.72□□□□□ -1.17
SMAD4-206ENST00000588860 FOXJ3Q9UPW0 622 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 LIPGQ9Y5X9 500 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 ETV7Q9Y603 341 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 SPTA1P02549 2419 aa7.72□□□□□ -1.17
SMAD4-206ENST00000588860 IGKV3D-15A0A087WSY6 115 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 TTLL8A6PVC2 850 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 EEF1E1O43324 174 aaKnown RBP7.71□□□□□ -1.18
SMAD4-206ENST00000588860 SYT7O43581 403 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 C1QL1O75973 258 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 KRT33AO76009 404 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 UBL3O95164 117 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 ACTL6AO96019 429 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 SLC2A1P11166 492 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 ZNF20P17024 532 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 IGFBP3P17936 291 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-206ENST00000588860 NTF4P34130 210 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 MAP2K3P46734 347 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 TNFSF10P50591 281 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 ART1P52961 327 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 PMP22Q01453 160 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 SLC10A1Q14973 349 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 RTP5Q14D33 572 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 BCL2A1Q16548 175 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 CCDC92Q53HC0 331 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-206ENST00000588860 GLT8D1Q68CQ7 371 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 ASPHD2Q6ICH7 369 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 PLXDC2Q6UX71 529 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 FAM57BQ71RH2 274 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 RHOUQ7L0Q8 258 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 CHMP1BQ7LBR1 199 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 CELF2-AS1Q8N7Q2 184 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 ZFP62Q8NB50 900 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-206ENST00000588860 FDCSPQ8NFU4 85 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 OR8B12Q8NGG6 310 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 ENKURQ8TC29 256 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 OR51E1Q8TCB6 317 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 FGGYQ96C11 551 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 PPP1R14BQ96C90 147 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 ZNF837Q96EG3 531 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-206ENST00000588860 PGAM5Q96HS1 289 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 ZFP3Q96NJ6 502 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 NEDD4LQ96PU5 975 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 ALKBH3Q96Q83 286 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-206ENST00000588860 PRRG4Q9BZD6 226 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 CRLF2Q9HC73 371 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 GPR35Q9HC97 309 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 DDX28Q9NUL7 540 aaKnown RBP7.71□□□□□ -1.18
SMAD4-206ENST00000588860 EMC3Q9P0I2 261 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 RABL2AQ9UBK7 228 aaPredicted RBP7.71□□□□□ -1.18
SMAD4-206ENST00000588860 RABL2BQ9UNT1 228 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 CAMK2AQ9UQM7 478 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 MRPS7Q9Y2R9 242 aaKnown RBP7.71□□□□□ -1.18
SMAD4-206ENST00000588860 NOSIPQ9Y314 301 aaKnown RBP7.71□□□□□ -1.18
SMAD4-206ENST00000588860 PIEZO2Q9H5I5 2752 aa7.71□□□□□ -1.18
SMAD4-206ENST00000588860 DOCK7Q96N67 2140 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 TRGV5A0A0B4J1U4 118 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 SLC17A2O00624 439 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 TFECO14948 347 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-206ENST00000588860 PLA2G10O15496 165 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 LANCL1O43813 399 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 HNRNPCP07910 306 aaKnown RBP eCLIP7.7□□□□□ -1.18
SMAD4-206ENST00000588860 CST2P09228 141 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 B4GALT1P15291 398 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 GNALP38405 381 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 HIST1H3AP68431 136 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 DGCR2P98153 550 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 GALK2Q01415 458 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 SPOCK1Q08629 439 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 RAB35Q15286 201 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 CEACAM16Q2WEN9 425 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 GFOD2Q3B7J2 385 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 RNFT1Q5M7Z0 435 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 ELFN2Q5R3F8 820 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 HIST2H3PS2Q5TEC6 136 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 FAM27BQ5VT28 67 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 HIST2H3AQ71DI3 136 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 LINGO2Q7L985 606 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 ABHD12BQ7Z5M8 362 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-206ENST00000588860 SERPINA12Q8IW75 414 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 MCEMP1Q8IX19 187 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 CADM3Q8N126 398 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 UBE2J2Q8N2K1 259 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 PLPP7Q8NBV4 271 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 OR1J2Q8NGS2 313 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 SYNPRQ8TBG9 265 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 RAB40AQ8WXH6 277 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 FBXO17Q96EF6 278 aa7.7□□□□□ -1.18
SMAD4-206ENST00000588860 S100A16Q96FQ6 103 aaKnown RBP7.7□□□□□ -1.18
SMAD4-206ENST00000588860 ABHD1Q96SE0 405 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms