RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 FBP1P09467 338 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 ZGLP1P0C6A0 271 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 OR2T7P0C7T2 308 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 GKN3PP0CG01 181 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 AKAIN1P0CW23 69 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 VSIG10L2P0DP72 767 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 F3P13726 295 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 NPPBP16860 134 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 ADCYAP1P18509 176 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 TBXA2RP21731 343 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 S100PP25815 95 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 DPP4P27487 766 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 PDHA2P29803 388 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 HSD17B2P37059 387 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 HAAOP46952 286 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 EIF1AXP47813 144 aaKnown RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 PREPP48147 710 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 STARP49675 285 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 HCCSP53701 268 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 RPS11P62280 158 aaKnown RBP eCLIP3.69□□□□□ -1.82
LIG3-211ENST00000588713 POLR2LP62875 67 aaKnown RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 SORDQ00796 357 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 NAAAQ02083 359 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 ECH1Q13011 328 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 CBFBQ13951 182 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 CRMP1Q14194 572 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 KIR2DS5Q14953 304 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 ARHGAP19Q14CB8 494 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 HSPB2Q16082 182 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 RNF212Q495C1 297 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 CCSMST1Q4G0I0 132 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 PAN3Q58A45 887 aaKnown RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 TEX30Q5JUR7 227 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SLC35D3Q5M8T2 416 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 GLT8D1Q68CQ7 371 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SFRP4Q6FHJ7 346 aaPredicted RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 C11orf88Q6PI97 169 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 KIRREL2Q6UWL6 708 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 DRAM2Q6UX65 266 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 ZNF813Q6ZN06 617 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SHISA6Q6ZSJ9 500 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 ESPNLQ6ZVH7 1005 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 DPPA4Q7L190 304 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 NDUFAF7Q7L592 441 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 OR2W3Q7Z3T1 314 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SZRD1Q7Z422 152 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 C17orf64Q86WR6 236 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 ZNF227Q86WZ6 799 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 C1QL4Q86Z23 238 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 GLB1L2Q8IW92 636 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 DCUN1D3Q8IWE4 304 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 NRMQ8IXM6 262 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 D2HGDHQ8N465 521 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 C15orf54Q8N8G6 183 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 OR5D16Q8NGK9 328 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 OR4C16Q8NGL9 310 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 OR1J4Q8NGS1 313 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 OR2T27Q8NH04 317 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 OR5J2Q8NH18 312 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 OR1L3Q8NH93 324 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 OR14A16Q8NHC5 309 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SYNPRQ8TBG9 265 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SMPDL3BQ92485 455 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 GHSRQ92847 366 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 GLYATL1Q969I3 302 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 EXOSC8Q96B26 276 aaKnown RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 NUS1Q96E22 293 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 S100A16Q96FQ6 103 aaKnown RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 RBM18Q96H35 190 aaKnown RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 TMEM41AQ96HV5 264 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 LINC00615Q96LM1 132 aaPredicted RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 SAMD8Q96LT4 415 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 HS6ST2Q96MM7 605 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 AMDHD1Q96NU7 426 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 DERL3Q96Q80 235 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 CD180Q99467 661 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 PTDSS2Q9BVG9 487 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SEC11CQ9BY50 192 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 GLIPR2Q9H4G4 154 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 BEX1Q9HBH7 125 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SLC17A5Q9NRA2 495 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 MMP26Q9NRE1 261 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SPHK1Q9NYA1 384 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 MTFP1Q9UDX5 166 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 ZNF629Q9UEG4 869 aaPredicted RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 Q9UFV3 132 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 IL20RAQ9UHF4 553 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 PCDHB10Q9UN67 800 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SLC17A4Q9Y2C5 497 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 A0A0A6YYH2 397 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 A0A0B4J203 849 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 OR6C68A6NDL8 312 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 GGT3PA6NGU5 568 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 A6NJ64 397 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 FAM183AA6NL82 134 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 OR2AG2A6NM03 316 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 C1orf196B1AJZ1 125 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 F8VVB4 439 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 F8VWA3 439 aa3.68□□□□□ -1.82
LIG3-211ENST00000588713 J3QLW9 94 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms