RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.6□□□□□ -1.03
TPM4-207ENST00000588032 MAPK1IP1LQ8NDC0 245 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 OR13G1Q8NGZ3 307 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 RNF133Q8WVZ7 376 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 ZMYND19Q96E35 227 aaPredicted RBP8.6□□□□□ -1.03
TPM4-207ENST00000588032 GABARAPL3Q9BY60 117 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 YIPF3Q9GZM5 350 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 POFUT1Q9H488 388 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 OPA3Q9H6K4 179 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 NIPAL2Q9H841 368 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 MSL2Q9HCI7 577 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 S100A14Q9HCY8 104 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 USE1Q9NZ43 259 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 PTTG3PQ9NZH4 202 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 IL19Q9UHD0 177 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 ORC6Q9Y5N6 252 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 TMEM14AQ9Y6G1 99 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 HIVEP1P15822 2718 aa8.6□□□□□ -1.03
TPM4-207ENST00000588032 ZSCAN5BA6NJL1 495 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 SAC3D1A6NKF1 404 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 SLC22A31A6NKX4 558 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 LYNX1G3V0Z9 82 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 XRCC2O43543 280 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 PRKYO43930 277 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 LILRA1O75019 489 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 RP2O75695 350 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 NCR1O76036 304 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 ALPLP05186 524 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 LYNP07948 512 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 H2BFMP0C1H6 154 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 LYNX1P0DP58 116 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 PSKH1P11801 424 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 CFL1P23528 166 aaKnown RBP8.59□□□□□ -1.03
TPM4-207ENST00000588032 TNFAIP6P98066 277 aaPredicted RBP8.59□□□□□ -1.03
TPM4-207ENST00000588032 GK2Q14410 553 aaPredicted RBP8.59□□□□□ -1.03
TPM4-207ENST00000588032 HLXQ14774 488 aaPredicted RBP8.59□□□□□ -1.03
TPM4-207ENST00000588032 NXNL2Q5VZ03 156 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 OR2T2Q6IF00 324 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 KCTD18Q6PI47 426 aaPredicted RBP8.59□□□□□ -1.03
TPM4-207ENST00000588032 DEGS2Q6QHC5 323 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 USP51Q70EK9 711 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 PGAP1Q75T13 922 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 MEPCEQ7L2J0 689 aaKnown RBP8.59□□□□□ -1.03
TPM4-207ENST00000588032 MRPL21Q7Z2W9 205 aaKnown RBP8.59□□□□□ -1.03
TPM4-207ENST00000588032 GID4Q8IVV7 300 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 ZNF283Q8N7M2 679 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 TCEANCQ8N8B7 351 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 OR2Z1Q8NG97 314 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 OR52H1Q8NGJ2 320 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 OR8J1Q8NGP2 316 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 TMEM163Q8TC26 289 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 THEM6Q8WUY1 208 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 TRUB1Q8WWH5 349 aaKnown RBP8.59□□□□□ -1.03
TPM4-207ENST00000588032 STMN2Q93045 179 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 YIPF5Q969M3 257 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 TIMD4Q96H15 378 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 MNTQ99583 582 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 C9orf16Q9BUW7 83 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 SLC22A4Q9H015 551 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 ZNF275Q9NSD4 429 aaPredicted RBP8.59□□□□□ -1.03
TPM4-207ENST00000588032 TMEM100Q9NV29 134 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 HAO2Q9NYQ3 351 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 LAMP5Q9UJQ1 280 aa8.59□□□□□ -1.03
TPM4-207ENST00000588032 NOP16Q9Y3C1 178 aaKnown RBP8.59□□□□□ -1.03
TPM4-207ENST00000588032 RTTNQ86VV8 2226 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 IGHV4-61A0A0C4DH41 118 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 A0A1B0GWJ7 208 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 CLDN25C9JDP6 229 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 IFNL4K9M1U5 179 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 PPIHO43447 177 aaKnown RBP8.58□□□□□ -1.04
TPM4-207ENST00000588032 SELENOFO60613 162 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 CDC14BO60729 498 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 ALOX5APP20292 161 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 EPHA2P29317 976 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 DDOSTP39656 456 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 OPRL1P41146 370 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 SRP9P49458 86 aaKnown RBP8.58□□□□□ -1.04
TPM4-207ENST00000588032 ALDH3A2P51648 485 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 PRKXP51817 358 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 CDC42P60953 191 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 KRTAP1-1Q07627 177 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 TMED1Q13445 227 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 AADACL4Q5VUY2 407 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 Q6ZR03 302 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 Q71RC1 249 aaPredicted RBP8.58□□□□□ -1.04
TPM4-207ENST00000588032 PEG10Q86TG7 708 aaKnown RBP8.58□□□□□ -1.04
TPM4-207ENST00000588032 PQLC1Q8N2U9 271 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 BBS1Q8NFJ9 593 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 SPRYD4Q8WW59 207 aaPredicted RBP8.58□□□□□ -1.04
TPM4-207ENST00000588032 ASB17Q8WXJ9 295 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 CCL17Q92583 94 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 GTF3AQ92664 365 aaKnown RBP8.58□□□□□ -1.04
TPM4-207ENST00000588032 RAB1CQ92928 201 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 ITFG2Q969R8 447 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 SPSB4Q96A44 273 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 SLC30A2Q9BRI3 323 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
TPM4-207ENST00000588032 RIBC2Q9H4K1 309 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 RGCCQ9H4X1 137 aa8.58□□□□□ -1.04
TPM4-207ENST00000588032 CCDC182A6NF36 153 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms