RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	GLYAT	Q6IB77	296 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SLC18B1	Q6NT16	456 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	DNM1P34	Q6PK57	102 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	BRD3OS	Q6XYD6	125 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	CFAP77	Q6ZQR2	320 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	LINC00346	Q8IVM7	164 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	FAM86B1	Q8N7N1	296 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	CELF2-AS1	Q8N7Q2	184 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	C19orf18	Q8NEA5	215 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460		Q8TCH9	128 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SLCO4A1	Q96BD0	722 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	PITX2	Q99697	317 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	CLN8	Q9UBY8	286 aa		13.63	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	TRAV40	A0A0B4J280	105 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	NDUFAB1	O14561	156 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	ARPC3	O15145	178 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	HOXA3	O43365	443 aa	Predicted RBP	13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	CCDC22	O60826	627 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	HIST1H1C	P16403	213 aa	Known RBP	13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	GGT2	P36268	569 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	PSMB10	P40306	273 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	RAD23A	P54725	363 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	PSME3	P61289	254 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	FGF12	P61328	243 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	HOXA4	Q00056	320 aa	Predicted RBP	13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	ECH1	Q13011	328 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	MPPED2	Q15777	294 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	DCDC5	Q6ZRR9	648 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	NLRC3	Q7RTR2	1065 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	ZBTB46	Q86UZ6	589 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	OR4K13	Q8NH42	304 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	ERGIC1	Q969X5	290 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	CCDC134	Q9H6E4	229 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	PNRC2	Q9NPJ4	139 aa	Known RBP	13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	ABCD2	Q9UBJ2	740 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	CYB5R1	Q9UHQ9	305 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	MMP24	Q9Y5R2	645 aa		13.62	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	OR6C68	A6NDL8	312 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	C22orf46	C9J442	243 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	TNFRSF13B	O14836	293 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	FAM20B	O75063	409 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	REN	P00797	406 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	LCAT	P04180	440 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	IRF2	P14316	349 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	CD200	P41217	278 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	NUDT2	P50583	147 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	TRAP1	Q12931	704 aa	Known RBP	13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SLC36A3	Q495N2	470 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	PRAMEF6	Q5VXH4	476 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SPATC1	Q76KD6	591 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	ZDHHC16	Q969W1	377 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	OR52D1	Q9H346	318 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	RPRD1B	Q9NQG5	326 aa	Known RBP	13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	UFSP2	Q9NUQ7	469 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	TMCC3	Q9ULS5	477 aa		13.61	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	FAM181B	A6NEQ2	426 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SRRM5	B3KS81	715 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	PHYH	O14832	338 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	CA6	P23280	308 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SLC6A6	P31641	620 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	BPIFB3	P59826	476 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	DEFA6	Q01524	100 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SRSF4	Q08170	494 aa	Known RBP	13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	MALL	Q13021	153 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	KRT72	Q14CN4	511 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460		Q6YL49	198 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	PGAP1	Q75T13	922 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	OR11L1	Q8NGX0	322 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	OR2AJ1	Q8NGZ0	328 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	ATF6B	Q99941	703 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	IFT27	Q9BW83	186 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	TNFRSF19	Q9NS68	423 aa		13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	MRPL22	Q9NWU5	206 aa	Known RBP	13.6	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	C5orf63	A6NC05	138 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	CD300LB	A8K4G0	201 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	TPTE	P56180	551 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SMIM11A	P58511	58 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	KIR3DL3	Q8N743	410 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	FANK1	Q8TC84	345 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	MAP6	Q96JE9	813 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	DDO	Q99489	341 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	FN3K	Q9H479	309 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	GORASP2	Q9H8Y8	452 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	NOX4	Q9NPH5	578 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	RNF7	Q9UBF6	113 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	CTSZ	Q9UBR2	303 aa		13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	SAMD4A	Q9UPU9	718 aa	Known RBP	13.59	□□□□□ -0.23
PRKAR1A-206	ENST00000585460	LGALS8	O00214	317 aa		13.58	□□□□□ -0.24
PRKAR1A-206	ENST00000585460	ENSA	O43768	121 aa	Known RBP	13.58	□□□□□ -0.24
PRKAR1A-206	ENST00000585460	IDH3B	O43837	385 aa		13.58	□□□□□ -0.24
PRKAR1A-206	ENST00000585460	GADD45G	O95257	159 aa		13.58	□□□□□ -0.24
PRKAR1A-206	ENST00000585460	PTBP3	O95758	552 aa	Known RBP	13.58	□□□□□ -0.24
PRKAR1A-206	ENST00000585460	HLA-DQA2	P01906	255 aa		13.58	□□□□□ -0.24
PRKAR1A-206	ENST00000585460	SEMG1	P04279	462 aa		13.58	□□□□□ -0.24
PRKAR1A-206	ENST00000585460	SFTPB	P07988	381 aa		13.58	□□□□□ -0.24
PRKAR1A-206	ENST00000585460	ANOS1	P23352	680 aa		13.58	□□□□□ -0.24
PRKAR1A-206	ENST00000585460	CFHR2	P36980	270 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms