RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 OR10A3P58181 314 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 PITPNAQ00169 270 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 SCN1BQ07699 218 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 MFGE8Q08431 387 aaPredicted RBP9.13□□□□□ -0.95
LIG3-203ENST00000585370 ZNF169Q14929 603 aaPredicted RBP9.13□□□□□ -0.95
LIG3-203ENST00000585370 RAB35Q15286 201 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 TRIM16LQ309B1 348 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 GLT8D1Q68CQ7 371 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 ZNF787Q6DD87 383 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 RPUSD3Q6P087 351 aaKnown RBP9.13□□□□□ -0.95
LIG3-203ENST00000585370 CNIH2Q6PI25 160 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 CFAP77Q6ZQR2 320 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 Q6ZS92 163 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 BTLAQ7Z6A9 289 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 DPPA2Q7Z7J5 298 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 LUZP2Q86TE4 346 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 LRRTM1Q86UE6 522 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 LYSMD2Q8IV50 215 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 RDH10Q8IZV5 341 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 ZNF433Q8N7K0 673 aaPredicted RBP9.13□□□□□ -0.95
LIG3-203ENST00000585370 ZNF671Q8TAW3 534 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 TRMT10AQ8TBZ6 339 aaKnown RBP9.13□□□□□ -0.95
LIG3-203ENST00000585370 ABHD3Q8WU67 409 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 C15orf40Q8WUR7 153 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 ITFG2Q969R8 447 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 SPTSSAQ969W0 71 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 SARAFQ96BY9 339 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 COX4I2Q96KJ9 171 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 FOXB1Q99853 325 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 SRRQ9GZT4 340 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 PRDM14Q9GZV8 571 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 HDHD2Q9H0R4 259 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 PNRC2Q9NPJ4 139 aaKnown RBP9.13□□□□□ -0.95
LIG3-203ENST00000585370 ABCB10Q9NRK6 738 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 FBXL3Q9UKT7 428 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 TIMM10BQ9Y5J6 103 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 CSAG2Q9Y5P2 127 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 ETV7Q9Y603 341 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 V9GYH0 126 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 ZGRF1Q86YA3 2104 aa9.13□□□□□ -0.95
LIG3-203ENST00000585370 NCKAP5O14513 1909 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 ZNF587BE7ETH6 402 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 RER1O15258 196 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 SYT7O43581 403 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 TTRP02766 147 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 ERCC1P07992 297 aaPredicted RBP9.12□□□□□ -0.95
LIG3-203ENST00000585370 ATF1P18846 271 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 NTF4P34130 210 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 OXA1LQ15070 435 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 CEACAM16Q2WEN9 425 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 SLC25A35Q3KQZ1 300 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 CCDC92Q53HC0 331 aaPredicted RBP9.12□□□□□ -0.95
LIG3-203ENST00000585370 PYDC2Q56P42 97 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 RNFT1Q5M7Z0 435 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 HACD4Q5VWC8 232 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 OTPQ5XKR4 325 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 DCDC5Q6ZRR9 648 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 DOK3Q7L591 496 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 ZNF627Q7L945 461 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 SERPINA12Q8IW75 414 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 TUSC5Q8IXB3 177 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 CDH26Q8IXH8 852 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 OR8H2Q8N162 312 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 CENPSQ8N2Z9 138 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 ZNF283Q8N7M2 679 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 SAMD12Q8N8I0 201 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 OR13C3Q8NGS6 347 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 FNDC9Q8TBE3 224 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 RAB40AQ8WXH6 277 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 APH1AQ96BI3 265 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 ZNF775Q96BV0 537 aaPredicted RBP9.12□□□□□ -0.95
LIG3-203ENST00000585370 C10orf35Q96D05 121 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 PPP1R3EQ9H7J1 279 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 BRD7Q9NPI1 651 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 ZNF275Q9NSD4 429 aaPredicted RBP9.12□□□□□ -0.95
LIG3-203ENST00000585370 TBCCD1Q9NVR7 557 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 UPB1Q9UBR1 384 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 ATPIF1Q9UII2 106 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 CAMK2AQ9UQM7 478 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 SLC5A6Q9Y289 635 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 CSMD2Q7Z408 3487 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 KIAA1549Q9HCM3 1950 aa9.12□□□□□ -0.95
LIG3-203ENST00000585370 A0A0U1RQV5 110 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 LOC107986453A0A1B0GWG9 222 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 OR14I1A6ND48 311 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 SLC22A20A6NK97 555 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 AHRRA9YTQ3 701 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 SGCEO43556 437 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 SULT1B1O43704 296 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 PTTG1O95997 202 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 WNT11O96014 354 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 CRYABP02511 175 aaKnown RBP9.11□□□□□ -0.95
LIG3-203ENST00000585370 ACSM4P0C7M7 580 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 OCMP0CE72 109 aaPredicted RBP9.11□□□□□ -0.95
LIG3-203ENST00000585370 IGFBP3P17936 291 aaPredicted RBP9.11□□□□□ -0.95
LIG3-203ENST00000585370 ELK1P19419 428 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 CCL1P22362 96 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 OTX1P32242 354 aaPredicted RBP9.11□□□□□ -0.95
LIG3-203ENST00000585370 PITPNBP48739 271 aa9.11□□□□□ -0.95
LIG3-203ENST00000585370 CX3CR1P49238 355 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms