RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	GOLGA8J	A6NMD2	632 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	SLC31A2	O15432	143 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	EMC8	O43402	210 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	PSTPIP1	O43586	416 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	KRT6A	P02538	564 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	RBMY1C	P0DJD4	496 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	SLC2A5	P22732	501 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	PBLD	P30039	288 aa	Predicted RBP	2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	ATP5C1	P36542	298 aa	Known RBP	2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	UQCRFS1	P47985	274 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	KLK7	P49862	253 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	RAP1B	P61224	184 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	KCNJ2	P63252	427 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	CYTH1	Q15438	398 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	CST6	Q15828	149 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	KRTAP21-3	Q3LHN1	58 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	COA6	Q5JTJ3	125 aa	Known RBP	2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	C9orf64	Q5T6V5	341 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	GUSBP11	Q6P575	273 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	TMEM107	Q6UX40	140 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	FAM220A	Q7Z4H9	259 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	SCD5	Q86SK9	330 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	DHDDS	Q86SQ9	333 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	SLC26A11	Q86WA9	606 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	ERI1	Q8IV48	349 aa	Known RBP	2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	CDH26	Q8IXH8	852 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	OR8J1	Q8NGP2	316 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	OR6X1	Q8NH79	312 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	AKR7L	Q8NHP1	331 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	KCNG3	Q8TAE7	436 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	WFDC5	Q8TCV5	224 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	ITCH	Q96J02	903 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	PLEKHA8	Q96JA3	519 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	ACTR6	Q9GZN1	396 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	C20orf85	Q9H1P6	137 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	DMAP1	Q9NPF5	467 aa	Predicted RBP	2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	KLHL28	Q9NXS3	571 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	RBAK	Q9NYW8	714 aa	Predicted RBP	2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	GGA2	Q9UJY4	613 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	LSM7	Q9UK45	103 aa	Known RBP	2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	KCNIP3	Q9Y2W7	256 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	LRP4	O75096	1905 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	CHD5	Q8TDI0	1954 aa		2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	SON	P18583	2426 aa	Known RBP	2.57	□□□□□ -2
PPP4R1-229	ENST00000584754	CROCC	Q5TZA2	2017 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754		A0A0B4J2A0	478 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	CTAGE15	A4D2H0	777 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	VPS37C	A5D8V6	355 aa	Predicted RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754		A8MUA0	341 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754		C9JVG2	144 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	HSD17B6	O14756	317 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	NVL	O15381	856 aa	Known RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	TNNC2	P02585	160 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	PNMA6A	P0CW24	399 aa	Predicted RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	LIPC	P11150	499 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	ICAM2	P13598	275 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	ATP1B2	P14415	290 aa	Predicted RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	ETS2	P15036	469 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	ATP6V1B2	P21281	511 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	PCMT1	P22061	227 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	HTR1E	P28566	365 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	OTX1	P32242	354 aa	Predicted RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	CD70	P32970	193 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	DRD3	P35462	400 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	SLC26A3	P40879	764 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	PSMD8	P48556	350 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	APOC4	P55056	127 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	MAP3K7CL	P57077	242 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	NUP107	P57740	925 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	FBXW4	P57775	412 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	NRF1	Q16656	503 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	HNRNPA1L2	Q32P51	320 aa	Known RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	ARMC12	Q5T9G4	340 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	RAET1L	Q5VY80	246 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	CENPQ	Q7L2Z9	268 aa	Predicted RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	ZNF720	Q7Z2F6	126 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	CTAGE6	Q86UF2	777 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	MMAA	Q8IVH4	418 aa	Known RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	C11orf42	Q8N5U0	333 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754		Q8N7P7	452 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	TPRX1	Q8N7U7	411 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	C12orf29	Q8N999	325 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	ACOT4	Q8N9L9	421 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	DDI1	Q8WTU0	396 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	FAM131C	Q96AQ9	280 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	SMARCD1	Q96GM5	515 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	ANKRD36BP1	Q96IX9	119 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	FAM210B	Q96KR6	192 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	HSFY1	Q96LI6	401 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	TECTB	Q96PL2	329 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	SORT1	Q99523	831 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	SH3GL3	Q99963	347 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	PELO	Q9BRX2	385 aa	Known RBP	2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	MED10	Q9BTT4	135 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	OR11A1	Q9GZK7	315 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	OR51J1	Q9H342	316 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	FBXO44	Q9H4M3	255 aa		2.56	□□□□□ -2
PPP4R1-229	ENST00000584754	METTL7A	Q9H8H3	244 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms