RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TMEM154Q6P9G4 183 aa13.29□□□□□ -0.28
SKA2-209ENST00000583976 USP51Q70EK9 711 aa13.29□□□□□ -0.28
SKA2-209ENST00000583976 SYT9Q86SS6 491 aa13.29□□□□□ -0.28
SKA2-209ENST00000583976 ALDH16A1Q8IZ83 802 aa13.29□□□□□ -0.28
SKA2-209ENST00000583976 SYNPRQ8TBG9 265 aa13.29□□□□□ -0.28
SKA2-209ENST00000583976 SNX33Q8WV41 574 aa13.29□□□□□ -0.28
SKA2-209ENST00000583976 ZMYND19Q96E35 227 aaPredicted RBP13.29□□□□□ -0.28
SKA2-209ENST00000583976 SLC6A7Q99884 636 aa13.29□□□□□ -0.28
SKA2-209ENST00000583976 TMPRSS13Q9BYE2 586 aa13.29□□□□□ -0.28
SKA2-209ENST00000583976 PLEK2Q9NYT0 353 aa13.29□□□□□ -0.28
SKA2-209ENST00000583976 LHFPL6Q9Y693 200 aa13.29□□□□□ -0.28
SKA2-209ENST00000583976 WNK2Q9Y3S1 2297 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 TRAV20A0A0B4J274 112 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 C5orf49A4QMS7 147 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 SGCEO43556 437 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 PLPP2O43688 288 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 DOK2O60496 412 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 SPARCP09486 303 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 ZNF250P15622 560 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 CDC42P60953 191 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 SLC34A1Q06495 639 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 SCRN3Q0VDG4 424 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 APOFQ13790 326 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 TSTQ16762 297 aaKnown RBP13.28□□□□□ -0.28
SKA2-209ENST00000583976 TBC1D28Q2M2D7 210 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 CCDC92Q53HC0 331 aaPredicted RBP13.28□□□□□ -0.28
SKA2-209ENST00000583976 ERI1Q8IV48 349 aaKnown RBP13.28□□□□□ -0.28
SKA2-209ENST00000583976 ZNF101Q8IZC7 436 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 OR2AJ1Q8NGZ0 328 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 FAM81AQ8TBF8 368 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 TMEM163Q8TC26 289 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 ZNF418Q8TF45 676 aaPredicted RBP13.28□□□□□ -0.28
SKA2-209ENST00000583976 ZFAND2BQ8WV99 257 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 UBE2FQ969M7 185 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 WACQ9BTA9 647 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 H2AFY2Q9P0M6 372 aaPredicted RBP13.28□□□□□ -0.28
SKA2-209ENST00000583976 WIPI2Q9Y4P8 454 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 COMMD3-BMI1R4GMX3 469 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 ARHGAP32A7KAX9 2087 aa13.28□□□□□ -0.28
SKA2-209ENST00000583976 LOC100509620A0A075B734 347 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 A0A0A6YYJ9 748 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 IGHV1-69-2A0A0G2JMI3 117 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 ZNF593O00488 134 aaPredicted RBP13.27□□□□□ -0.29
SKA2-209ENST00000583976 SPRY1O43609 319 aaPredicted RBP13.27□□□□□ -0.29
SKA2-209ENST00000583976 IGHV2-5P01817 119 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 PSKH1P11801 424 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 GSTT1P30711 240 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 GGT2P36268 569 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 MPV17P39210 176 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 WNT5AP41221 380 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 HTR5AP47898 357 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 ENTPD1P49961 510 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 GDI2P50395 445 aaKnown RBP13.27□□□□□ -0.29
SKA2-209ENST00000583976 EFNB1P98172 346 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 OGFRL1Q5TC84 451 aaPredicted RBP13.27□□□□□ -0.29
SKA2-209ENST00000583976 SLC18B1Q6NT16 456 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 RFPL4BQ6ZWI9 263 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 VASH1Q7L8A9 365 aaPredicted RBP13.27□□□□□ -0.29
SKA2-209ENST00000583976 PEG10Q86TG7 708 aaKnown RBP13.27□□□□□ -0.29
SKA2-209ENST00000583976 GJC3Q8NFK1 279 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 OR1J2Q8NGS2 313 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 OR6N2Q8NGY6 317 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 IPCEF1Q8WWN9 437 aaPredicted RBP13.27□□□□□ -0.29
SKA2-209ENST00000583976 HRASLS5Q96KN8 279 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 C1orf198Q9H425 327 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 SAP30LQ9HAJ7 183 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 RNPEPL1Q9HAU8 725 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 ESM1Q9NQ30 184 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 IMPAD1Q9NX62 359 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 SMPD3Q9NY59 655 aaPredicted RBP13.27□□□□□ -0.29
SKA2-209ENST00000583976 CYB5R1Q9UHQ9 305 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 PCDHB10Q9UN67 800 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 GMPPBQ9Y5P6 360 aa13.27□□□□□ -0.29
SKA2-209ENST00000583976 ZSCAN5BA6NJL1 495 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 CLDN25C9JDP6 229 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 DLGAP1O14490 977 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 CASQ2O14958 399 aaPredicted RBP13.26□□□□□ -0.29
SKA2-209ENST00000583976 PRODHO43272 600 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 TPD52L2O43399 206 aaKnown RBP13.26□□□□□ -0.29
SKA2-209ENST00000583976 SELENOFO60613 162 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 SLC2A5P22732 501 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 BLVRAP53004 296 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 UCP2P55851 309 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 PCGF3Q3KNV8 242 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 SPRNQ5BIV9 151 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 SLC35D3Q5M8T2 416 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 CFAP77Q6ZQR2 320 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 C1QL2Q7Z5L3 287 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 OR1J1Q8NGS3 322 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 C22orf15Q8WYQ4 148 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 SLC7A6Q92536 515 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 POM121L2Q96KW2 1035 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 INTS14Q96SY0 518 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 TEAD3Q99594 435 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 PITX2Q99697 317 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 FAM118AQ9NWS6 357 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 DCAF16Q9NXF7 216 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 AASSQ9UDR5 926 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 TRRAPQ9Y4A5 3859 aa13.26□□□□□ -0.29
SKA2-209ENST00000583976 LOC100130705A0A1B0GUX0 176 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms