RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 IGHV3-64DA0A0J9YX35 117 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 TMEM178BH3BS89 294 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 HOXA3O43365 443 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 CYB5R3P00387 301 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 IGF2P01344 180 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 AMY1AP04745 511 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 WNT2P09544 360 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 THRBP10828 461 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 IFI30P13284 250 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 KITLGP21583 273 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 MSR1P21757 451 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 OR1E2P47887 323 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 HTR5AP47898 357 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 MTNR1AP48039 350 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 CTXN1P60606 82 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 RPL27P61353 136 aaKnown RBP6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 PCBD1P61457 104 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 PAX2Q02962 417 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 OTPQ5XKR4 325 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 CD276Q5ZPR3 534 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 C1orf94Q6P1W5 598 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 C16orf87Q6PH81 154 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 ARL9Q6T311 187 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 BTNL3Q6UXE8 466 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 BRD3OSQ6XYD6 125 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 CCDC80Q76M96 950 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 ZER1Q7Z7L7 766 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 KLBQ86Z14 1044 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 MUC20Q8N307 709 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 LRRC75AQ8NAA5 344 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 OR10AD1Q8NGE0 317 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 SLC7A6Q92536 515 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 UPRTQ96BW1 309 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 CMBLQ96DG6 245 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 RBP7Q96R05 134 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 SSBP3Q9BWW4 388 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 RABEP2Q9H5N1 569 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 GCM1Q9NP62 436 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 TNFRSF19Q9NS68 423 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 MAN2C1Q9NTJ4 1040 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 TBCCD1Q9NVR7 557 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 PDP1Q9P0J1 537 aaPredicted RBP6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 IL19Q9UHD0 177 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 STARD10Q9Y365 291 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 DBX1A6NMT0 343 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 C12orf71A8MTZ7 269 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 H0YL77 283 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 F2RL2O00254 374 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 SURF4O15260 269 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 SGCEO43556 437 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 AHCYL1O43865 530 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 KNG1P01042 644 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 PPIAL4GP0DN37 164 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 COX5BP10606 129 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 GUCA1AP43080 201 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 GNB2P62879 340 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 SCRN3Q0VDG4 424 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 HLXQ14774 488 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 ZNF124Q15973 351 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 DEFB112Q30KQ8 113 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 LRRC23Q53EV4 343 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 RABL3Q5HYI8 236 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 FAM201AQ5SY85 155 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 RUSC1-AS1Q66K80 236 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 LRRN1Q6UXK5 716 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 C17orf107Q6ZR85 190 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 KIR3DL3Q8N743 410 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 OR10S1Q8NGN2 331 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 OR51A7Q8NH64 312 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 FNDC8Q8TC99 324 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 DACT3Q96B18 629 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 BPIFA2Q96DR5 249 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 C1orf43Q9BWL3 253 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 POLR2J2Q9GZM3 115 aaKnown RBP6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 POLR2J3Q9H1A7 115 aaKnown RBP6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 GHITMQ9H3K2 345 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 MARCH7Q9H992 704 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 TMEM165Q9HC07 324 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 PTTG3PQ9NZH4 202 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 IL20RAQ9UHF4 553 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 BAG5Q9UL15 447 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 MMP24Q9Y5R2 645 aa6.5□□□□□ -1.37
SMCHD1-210ENST00000583800 HMX3A6NHT5 357 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 A6NIZ1 184 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 SRRM5B3KS81 715 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 FXYD1O00168 92 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 FBP2O00757 339 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 DBHP09172 617 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 SELEP16581 610 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 CALRP27797 417 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 YAP1P46937 504 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 RAG2P55895 527 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 RAP1BP61224 184 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 RAP1AP62834 184 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 CD69Q07108 199 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 ST3GAL3Q11203 375 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 FHL1Q13642 323 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 ZNF404Q494X3 552 aa6.49□□□□□ -1.37
SMCHD1-210ENST00000583800 MESTQ5EB52 335 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms