RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 LRFN3Q9BTN0 628 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 CABLES2Q9BTV7 478 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 SF3B5Q9BWJ5 86 aaKnown RBP8.48□□□□□ -1.05
SKA2-207ENST00000583380 PARD6GQ9BYG4 376 aaPredicted RBP8.48□□□□□ -1.05
SKA2-207ENST00000583380 OR52D1Q9H346 318 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 ZNF552Q9H707 407 aaPredicted RBP8.48□□□□□ -1.05
SKA2-207ENST00000583380 ELL3Q9HB65 397 aaPredicted RBP8.48□□□□□ -1.05
SKA2-207ENST00000583380 OR2S2Q9NQN1 319 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 CBLN4Q9NTU7 201 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 BET1LQ9NYM9 111 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 GSKIPQ9P0R6 139 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 CXXC1Q9P0U4 656 aaPredicted RBP8.48□□□□□ -1.05
SKA2-207ENST00000583380 UQCR10Q9UDW1 63 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 SLC23A2Q9UGH3 650 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 ZNF230Q9UIE0 474 aaPredicted RBP8.48□□□□□ -1.05
SKA2-207ENST00000583380 SERTAD3Q9UJW9 196 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 ZNF346Q9UL40 294 aaKnown RBP8.48□□□□□ -1.05
SKA2-207ENST00000583380 COLEC10Q9Y6Z7 277 aa8.48□□□□□ -1.05
SKA2-207ENST00000583380 ZNF106Q9H2Y7 1883 aaKnown RBP8.48□□□□□ -1.05
SKA2-207ENST00000583380 TRPM7Q96QT4 1865 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 TRBV5-7A0A0A0MS05 114 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 TRAV1-1A0A0B4J248 108 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 IGHV2-70DA0A0C4DH43 119 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 C13orf42A0A1B0GVH6 325 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 CCDC85CA6NKD9 419 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 PROB1E7EW31 1015 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 J3QR06 171 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 RRP8O43159 456 aaKnown RBP8.47□□□□□ -1.05
SKA2-207ENST00000583380 B3GALT4O96024 378 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 TYMSP04818 313 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 ZNF735P0CB33 412 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 LIPCP11150 499 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 BUD31P41223 144 aaPredicted RBP8.47□□□□□ -1.05
SKA2-207ENST00000583380 ALDH3B1P43353 468 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 CSNK1A1P48729 337 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 BLKP51451 505 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 CCR5P51681 352 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 PDX1P52945 283 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 BIDP55957 195 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 CLDN18P56856 261 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 PFN3P60673 137 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 IL24Q13007 206 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 PPP1R1AQ13522 171 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 ARL6IP1Q15041 203 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 ODF4Q2M2E3 257 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 AMZ1Q400G9 498 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 FAM219BQ5XKK7 198 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 FBXO42Q6P3S6 717 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 SLC24A5Q71RS6 500 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 TMPRSS7Q7RTY8 843 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 TMPRSS12Q86WS5 348 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 SLC35F2Q8IXU6 374 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 ZNF595Q8IYB9 648 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 GBGT1Q8N5D6 347 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 ZNF248Q8NDW4 579 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 OR14C36Q8NHC7 312 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 WFIKKN2Q8TEU8 576 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 C2orf15Q8WU43 125 aaKnown RBP8.47□□□□□ -1.05
SKA2-207ENST00000583380 HMGB4Q8WW32 186 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 NEIL2Q969S2 332 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 MCHR2Q969V1 340 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 RPUSD4Q96CM3 377 aaKnown RBP8.47□□□□□ -1.05
SKA2-207ENST00000583380 TMEM169Q96HH4 297 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 PCED1BQ96HM7 432 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 FAM46AQ96IP4 442 aaKnown RBP8.47□□□□□ -1.05
SKA2-207ENST00000583380 ZNF514Q96K75 400 aaPredicted RBP8.47□□□□□ -1.05
SKA2-207ENST00000583380 SGCZQ96LD1 299 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 GNRHR2Q96P88 292 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 TXN2Q99757 166 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 GPA33Q99795 319 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 MRPL13Q9BYD1 178 aaKnown RBP8.47□□□□□ -1.05
SKA2-207ENST00000583380 CHST6Q9GZX3 395 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 MOB1AQ9H8S9 216 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 PRM3Q9NNZ6 103 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.47□□□□□ -1.05
SKA2-207ENST00000583380 SEMA5BQ9P283 1151 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 RNF150Q9ULK6 438 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 MRPS16Q9Y3D3 137 aaKnown RBP8.47□□□□□ -1.05
SKA2-207ENST00000583380 OR51B4Q9Y5P0 310 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 MGAMO43451 1857 aa8.47□□□□□ -1.05
SKA2-207ENST00000583380 SCN1AP35498 2009 aa8.46□□□□□ -1.05
SKA2-207ENST00000583380 MAP1LC3B2A6NCE7 125 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 C1QTNF3-AMACRE9PGA6 284 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 CLDN5O00501 218 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 PEX12O00623 359 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 AGPAT2O15120 278 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 LATO43561 262 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 GPR137BO60478 399 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 CNMDO75829 334 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 SNAI1O95863 264 aaPredicted RBP8.46□□□□□ -1.06
SKA2-207ENST00000583380 TGFB1P01137 390 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 SRP14P37108 136 aaKnown RBP8.46□□□□□ -1.06
SKA2-207ENST00000583380 PBX2P40425 430 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 FOXK1P85037 733 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 TGM3Q08188 693 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 ENPP2Q13822 863 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 BSXQ3C1V8 233 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 ZNF385BQ569K4 471 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 TMEM41BQ5BJD5 291 aa8.46□□□□□ -1.06
SKA2-207ENST00000583380 VAX1Q5SQQ9 334 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms