RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 BPESC1Q9GZL8 116 aa10.73□□□□□ -0.69
SNORD55-201ENST00000581525 YIPF3Q9GZM5 350 aa10.73□□□□□ -0.69
SNORD55-201ENST00000581525 IL19Q9UHD0 177 aa10.73□□□□□ -0.69
SNORD55-201ENST00000581525 CR1P17927 2039 aa10.73□□□□□ -0.69
SNORD55-201ENST00000581525 YLPM1P49750 1951 aaKnown RBP10.72□□□□□ -0.69
SNORD55-201ENST00000581525 TLN2Q9Y4G6 2542 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 IGHV4-61A0A0C4DH41 118 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 PLSCR5A0PG75 271 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 LYNX1G3V0Z9 82 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 TLX2O43763 284 aaPredicted RBP10.72□□□□□ -0.69
SNORD55-201ENST00000581525 APOC1P02654 83 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 SPARCP09486 303 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 LYNX1P0DP58 116 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 SELEP16581 610 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 ANOS1P23352 680 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 DCTDP32321 178 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 SLC15A1P46059 708 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 ALDH3A2P51648 485 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 CCL8P80075 99 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 APOFQ13790 326 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 EIF2B1Q14232 305 aaKnown RBP10.72□□□□□ -0.69
SNORD55-201ENST00000581525 HLXQ14774 488 aaPredicted RBP10.72□□□□□ -0.69
SNORD55-201ENST00000581525 MEPCEQ7L2J0 689 aaKnown RBP10.72□□□□□ -0.69
SNORD55-201ENST00000581525 KRT74Q7RTS7 529 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 SLC16A9Q7RTY1 509 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 MAPK1IP1LQ8NDC0 245 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 OR6N2Q8NGY6 317 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 TRUB1Q8WWH5 349 aaKnown RBP10.72□□□□□ -0.69
SNORD55-201ENST00000581525 HPS1Q92902 700 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 ITFG2Q969R8 447 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 HRASLS5Q96KN8 279 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 OPA3Q9H6K4 179 aa10.72□□□□□ -0.69
SNORD55-201ENST00000581525 ZNF275Q9NSD4 429 aaPredicted RBP10.72□□□□□ -0.69
SNORD55-201ENST00000581525 IGHV1-69-2A0A0G2JMI3 117 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 SAC3D1A6NKF1 404 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 TIMM8AO60220 97 aaPredicted RBP10.71□□□□□ -0.69
SNORD55-201ENST00000581525 SELENOFO60613 162 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 ABCA1O95477 2261 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 LCATP04180 440 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 LYNP07948 512 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 RIPPLY3P57055 190 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 ROM1Q03395 351 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 TMED1Q13445 227 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 SNAI3Q3KNW1 292 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 KLHL12Q53G59 568 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 OR2T2Q6IF00 324 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 PQLC1Q8N2U9 271 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 TCEANCQ8N8B7 351 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 OR8J1Q8NGP2 316 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 OR13G1Q8NGZ3 307 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 MNTQ99583 582 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 NIPAL2Q9H841 368 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 SP140LQ9H930 580 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 MSL2Q9HCI7 577 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 CENPMQ9NSP4 180 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 DECR2Q9NUI1 292 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 TMEM160Q9NX00 188 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 PTTG3PQ9NZH4 202 aa10.71□□□□□ -0.69
SNORD55-201ENST00000581525 SVEP1Q4LDE5 3571 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 C5orf63A6NC05 138 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 ACOD1A6NK06 481 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 SLC22A31A6NKX4 558 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 FSTL3O95633 263 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 PTBP3O95758 552 aaKnown RBP10.7□□□□□ -0.7
SNORD55-201ENST00000581525 IGHV4-31P0DP07 118 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 HOXB4P17483 251 aaPredicted RBP10.7□□□□□ -0.7
SNORD55-201ENST00000581525 DDOSTP39656 456 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 GZMKP49863 264 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 RAD23AP54725 363 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 ZNF92Q03936 586 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 MALLQ13021 153 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 SPRNQ5BIV9 151 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 LCN1P1Q5VSP4 162 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 PGAP1Q75T13 922 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 CELF2-AS1Q8N7Q2 184 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 OTULINQ96BN8 352 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 ELMOD3Q96FG2 381 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 ZNF582Q96NG8 517 aaPredicted RBP10.7□□□□□ -0.7
SNORD55-201ENST00000581525 SLC29A1Q99808 456 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 COPS4Q9BT78 406 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 C9orf16Q9BUW7 83 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 EGLN1Q9GZT9 426 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 SAP30LQ9HAJ7 183 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 KLHDC2Q9Y2U9 406 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 TMEM14AQ9Y6G1 99 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 HIVEP2P31629 2446 aa10.7□□□□□ -0.7
SNORD55-201ENST00000581525 FN1P02751 2386 aaKnown RBP10.7□□□□□ -0.7
SNORD55-201ENST00000581525 CD300LBA8K4G0 201 aa10.69□□□□□ -0.7
SNORD55-201ENST00000581525 IFNL4K9M1U5 179 aa10.69□□□□□ -0.7
SNORD55-201ENST00000581525 EI24O14681 340 aa10.69□□□□□ -0.7
SNORD55-201ENST00000581525 XRCC2O43543 280 aa10.69□□□□□ -0.7
SNORD55-201ENST00000581525 SPRY3O43610 288 aa10.69□□□□□ -0.7
SNORD55-201ENST00000581525 ZNF254O75437 659 aa10.69□□□□□ -0.7
SNORD55-201ENST00000581525 GATA4P43694 442 aa10.69□□□□□ -0.7
SNORD55-201ENST00000581525 GPR6P46095 362 aaPredicted RBP10.69□□□□□ -0.7
SNORD55-201ENST00000581525 PRKXP51817 358 aa10.69□□□□□ -0.7
SNORD55-201ENST00000581525 CHN2P52757 468 aa10.69□□□□□ -0.7
SNORD55-201ENST00000581525 LMO4P61968 165 aa10.69□□□□□ -0.7
SNORD55-201ENST00000581525 SNRPGP62308 76 aaKnown RBP10.69□□□□□ -0.7
SNORD55-201ENST00000581525 TSTQ16762 297 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms