RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ZFAND3Q9H8U3 227 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 FAM206AQ9NX38 181 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 SLCO1C1Q9NYB5 712 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 NUFIP1Q9UHK0 495 aaKnown RBP8.98□□□□□ -0.97
CCDC47-203ENST00000580986 FBXO9Q9UK97 447 aaPredicted RBP8.98□□□□□ -0.97
CCDC47-203ENST00000580986 IKZF2Q9UKS7 526 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 ERGIC3Q9Y282 383 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 DOPEY2Q9Y3R5 2298 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 A0A0U1RQV5 110 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 PTGES3LE9PB15 166 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 F5H5K5 113 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 XRCC2O43543 280 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 CTAG2O75638 210 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 MT-ND5P03915 603 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 DBHP09172 617 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 CFL1P23528 166 aaKnown RBP8.97□□□□□ -0.97
CCDC47-203ENST00000580986 C21orf33P30042 268 aaPredicted RBP8.97□□□□□ -0.97
CCDC47-203ENST00000580986 SSTR2P30874 369 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 WNT5AP41221 380 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 CX3CR1P49238 355 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 ETV1P50549 477 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 CCR9P51686 369 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 TAS2R43P59537 309 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 MVKQ03426 396 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 TLE4Q04727 773 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 HGFACQ04756 655 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF672Q499Z4 452 aaPredicted RBP8.97□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF544Q6NX49 715 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 LHFPL3Q86UP9 236 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 PAQR4Q8N4S7 273 aaPredicted RBP8.97□□□□□ -0.97
CCDC47-203ENST00000580986 NANOGP1Q8N7R0 232 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 RPS4Y2Q8TD47 263 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 SMAP2Q8WU79 429 aaPredicted RBP8.97□□□□□ -0.97
CCDC47-203ENST00000580986 SPSB4Q96A44 273 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 PELI1Q96FA3 418 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 C4orf36Q96KX1 117 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 TBX5Q99593 518 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 MND1Q9BWT6 205 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF696Q9H7X3 374 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 CA10Q9NS85 328 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 R4GMQ9 66 aa8.97□□□□□ -0.97
CCDC47-203ENST00000580986 RAI1Q7Z5J4 1906 aaPredicted RBP8.97□□□□□ -0.97
CCDC47-203ENST00000580986 TMEM269A0A1B0GVZ9 245 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 VSTM5A8MXK1 200 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ATP6V1G2-DDX39BF2Z307 99 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 LOC110117498-PIK3R3F6TDL0 507 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 MYL12BO14950 172 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 IGLV3-1P01715 115 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 CD1AP06126 327 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 HTR1AP08908 422 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ADRA2AP08913 450 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 CCL2P13500 99 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ATP6V1B1P15313 513 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ZNF250P15622 560 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 EVX1P49640 407 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 PRKXP51817 358 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 WNT4P56705 351 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 OR12D2P58182 307 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ZNF121P58317 390 aaPredicted RBP8.96□□□□□ -0.98
CCDC47-203ENST00000580986 SNTB2Q13425 540 aaKnown RBP8.96□□□□□ -0.98
CCDC47-203ENST00000580986 MBNL2Q5VZF2 373 aaKnown RBP8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ZNF773Q6PK81 442 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 SLC22A25Q6T423 547 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 FBXW12Q6X9E4 464 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ZNF704Q6ZNC4 412 aaPredicted RBP8.96□□□□□ -0.98
CCDC47-203ENST00000580986 Q6ZSR3 168 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 RFPL4BQ6ZWI9 263 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ZNF101Q8IZC7 436 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 SVOPQ8N4V2 548 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ZNF283Q8N7M2 679 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 YIPF7Q8N8F6 280 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 CCDC54Q8NEL0 328 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 KBTBD8Q8NFY9 601 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 TMEM171Q8WVE6 324 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 SLC7A6Q92536 515 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 RORBQ92753 470 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ITPKCQ96DU7 683 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 PIK3IP1Q96FE7 263 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ISYNA1Q9NPH2 558 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 TRIM36Q9NQ86 728 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 ACOXLQ9NUZ1 547 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 CGGBP1Q9UFW8 167 aaPredicted RBP8.96□□□□□ -0.98
CCDC47-203ENST00000580986 GNG8Q9UK08 70 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 GRIP1Q9Y3R0 1128 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 SNX5Q9Y5X3 404 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 PTPN13Q12923 2485 aa8.96□□□□□ -0.98
CCDC47-203ENST00000580986 HEATR1Q9H583 2144 aaKnown RBP8.96□□□□□ -0.98
CCDC47-203ENST00000580986 CADP27708 2225 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 PKDREJQ9NTG1 2253 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 IGLV3-9A0A075B6K5 115 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 LOC390937A0A1W2PQ73 354 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 TRIM64CA6NLI5 447 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 DHRS7CA6NNS2 312 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 HS3ST1O14792 307 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 LCATP04180 440 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 ISG15P05161 165 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 UBCP0CG48 685 aaKnown RBP8.95□□□□□ -0.98
CCDC47-203ENST00000580986 RAC2P15153 192 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 CCNOP22674 350 aa8.95□□□□□ -0.98
CCDC47-203ENST00000580986 EEF1B2P24534 225 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms