RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ZNF680Q8NEM1 530 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR2V1Q8NHB1 315 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF431Q8TF32 576 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PCNPQ8WW12 178 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OXGR1Q96P68 337 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 LIN7BQ9HAP6 207 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TPRP12270 2363 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 A0A1W2PNV4 684 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 IFITM5A6NNB3 132 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ABHD16AO95870 558 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CD1AP06126 327 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CLDN18P56856 261 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PXDC1Q5TGL8 231 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FCRLAQ7L513 359 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CMTM4Q8IZR5 234 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR8H3Q8N146 312 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TOMM5Q8N4H5 51 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR11H7Q8NGC8 314 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TMEM106AQ96A25 262 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 COQ3Q9NZJ6 369 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF222Q9UK12 451 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SPATA2Q9UM82 520 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 V9GY05 133 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ANXA2P2A6NMY6 339 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 DOK2O60496 412 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 IGHMP01871 453 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ANXA2P07355 339 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF250P15622 560 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FKBP2P26885 142 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MAPK3P27361 379 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CDAP32320 146 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SELENOPP49908 381 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 DAP3P51398 398 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 CSNK2A1P68400 391 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GLO1Q04760 184 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 EGR3Q06889 387 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 EIF2B1Q14232 305 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC17A1Q14916 467 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PHYHD1Q5SRE7 291 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC18B1Q6NT16 456 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 STAC2Q6ZMT1 411 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 LINGO2Q7L985 606 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZIC4Q8N9L1 334 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PPP1R14AQ96A00 147 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TAAR6Q96RI8 345 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MRPL22Q9NWU5 206 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 VSX1Q9NZR4 365 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SPRR3Q9UBC9 169 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 KLK11Q9UBX7 282 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MGAT4AQ9UM21 535 aa11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MRPS18CQ9Y3D5 142 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-217ENST00000580287 RELNP78509 3460 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TLN1Q9Y490 2541 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 IGLV1-36A0A0B4J1U3 117 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GJE1A6NN92 205 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 I3L521 148 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 GMDSO60547 372 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TMIGD3P0DMS9 266 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 BTG1P62324 171 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PRSS35Q8N3Z0 413 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 OR9K2Q8NGE7 335 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 FNDC9Q8TBE3 224 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 PHYHIPQ92561 330 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ABHD17AQ96GS6 310 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MRPL13Q9BYD1 178 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 MED28Q9H204 178 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ZNF71Q9NQZ8 489 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 ING4Q9UNL4 249 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 SLC22A13Q9Y226 551 aa11.21□□□□□ -0.61
CDK5RAP3-217ENST00000580287 TRAV17A0A0B4J275 112 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CIB4A0PJX0 185 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR4C45A6NMZ5 311 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 C1QTNF9BB2RNN3 333 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 NPIPA2E9PIF3 369 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 NPIPA3F8WFD2 350 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 AIPO00170 330 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PHYHO14832 338 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 AQP8O94778 261 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TOXO94900 526 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 UBL3O95164 117 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RAF1P04049 648 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TCRBP04435 133 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TPOP07202 933 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 C1QTNF9P0C862 333 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ID4P47928 161 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PITPNAQ00169 270 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 POU4F3Q15319 338 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 WDR38Q5JTN6 314 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 UBE2NLQ5JXB2 153 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CORO6Q6QEF8 472 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LINC00346Q8IVM7 164 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR11H4Q8NGC9 324 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 GPR148Q8TDV2 347 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF837Q96EG3 531 aaPredicted RBP11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 MNTQ99583 582 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CACNG6Q9BXT2 260 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 KCNK15Q9H427 330 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 HEXA-AS1Q9H8Q6 139 aa11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PFDN2Q9UHV9 154 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms