RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 R4GMQ9 66 aa10.48□□□□□ -0.73
IFT20-207ENST00000578547 TMEM129A0AVI4 362 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 C5orf63A6NC05 138 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 PNPP00491 289 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 NR4A1P22736 598 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 ANOS1P23352 680 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 GBX2P52951 348 aaPredicted RBP10.47□□□□□ -0.73
IFT20-207ENST00000578547 UCP2P55851 309 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 WNT4P56705 351 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 ERVS71-1P61550 626 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 ODF4Q2M2E3 257 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 SNAI3Q3KNW1 292 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 ZNF773Q6PK81 442 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 ZNF704Q6ZNC4 412 aaPredicted RBP10.47□□□□□ -0.73
IFT20-207ENST00000578547 KCTD20Q7Z5Y7 419 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 COMMD2Q86X83 199 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 NANOGP1Q8N7R0 232 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 OR1J1Q8NGS3 322 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 OR52N1Q8NH53 320 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 RORBQ92753 470 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 NEUROG1Q92886 237 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 APOBEC3DQ96AK3 386 aaPredicted RBP10.47□□□□□ -0.73
IFT20-207ENST00000578547 SIGLEC11Q96RL6 698 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 POFUT1Q9H488 388 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 FAM206AQ9NX38 181 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 PTTG3PQ9NZH4 202 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 FZR1Q9UM11 496 aa10.47□□□□□ -0.73
IFT20-207ENST00000578547 CADP27708 2225 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 ABCA4P78363 2273 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 FAM221AA4D161 298 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 SHISA9B4DS77 424 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 E9PI62 339 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 PCSK6P29122 969 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 THBS4P35443 961 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 RAD52P43351 418 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 GTF2A1P52655 376 aaPredicted RBP10.46□□□□□ -0.73
IFT20-207ENST00000578547 PRSS12P56730 875 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 PPP1CBP62140 327 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 MALLQ13021 153 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 IRF3Q14653 427 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 MED22Q15528 200 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 TIGD6Q17RP2 521 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 WDR38Q5JTN6 314 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 RNLSQ5VYX0 342 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 UNQ6126/PRO20091Q6UXV3 157 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 TMEM200AQ86VY9 491 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 SVOPQ8N4V2 548 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 ZFP41Q8N8Y5 198 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 TSPAN14Q8NG11 270 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 OR8B12Q8NGG6 310 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 OR2AE1Q8NHA4 323 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 MARVELD3Q96A59 401 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 OR5M11Q96RB7 305 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 NR1H4Q96RI1 486 aaPredicted RBP10.46□□□□□ -0.73
IFT20-207ENST00000578547 TMEM204Q9BSN7 226 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 C1QTNF5Q9BXJ0 243 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 BCL2L14Q9BZR8 327 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 PBOV1Q9GZY1 135 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 OR10A2Q9H208 303 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 ZNF696Q9H7X3 374 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 MOB1AQ9H8S9 216 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 SP140LQ9H930 580 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 TRIM36Q9NQ86 728 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 TBCCD1Q9NVR7 557 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 OR52A1Q9UKL2 312 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 SLC22A13Q9Y226 551 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 STARD10Q9Y365 291 aa10.46□□□□□ -0.73
IFT20-207ENST00000578547 RTTNQ86VV8 2226 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 PNMA8CA0A1B0GUJ8 204 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 MRPS14O60783 128 aaKnown RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 SRSF10O75494 262 aaKnown RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 CTAG2O75638 210 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 ATE1O95260 518 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 LALBAP00709 142 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 RPSAP08865 295 aaKnown RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 HSMCR30P0CW71 290 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 ATP6V1B1P15313 513 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 DCTDP32321 178 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 MMP16P51512 607 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 NANOS3P60323 173 aaKnown RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 RPS23P62266 143 aaKnown RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 NKX6-1P78426 367 aaPredicted RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 TLE4Q04727 773 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 DOC2BQ14184 412 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 HLXQ14774 488 aaPredicted RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 SPHARQ15513 63 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 TBCEQ15813 527 aaPredicted RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 ZNF672Q499Z4 452 aaPredicted RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 GLYATL3Q5SZD4 288 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 XAF1Q6GPH4 301 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 RGS7BPQ6MZT1 257 aaPredicted RBP10.45□□□□□ -0.74
IFT20-207ENST00000578547 ZNF544Q6NX49 715 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 PRSS45Q7RTY3 260 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 CATSPERDQ86XM0 798 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 SPARTQ8N0X7 666 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 NUP37Q8NFH4 326 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 OR52H1Q8NGJ2 320 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 OR5L1Q8NGL2 311 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 SLC25A40Q8TBP6 338 aa10.45□□□□□ -0.74
IFT20-207ENST00000578547 AKAP1Q92667 903 aaKnown RBP eCLIP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms