RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 LRP12Q9Y561 859 aa9.64□□□□□ -0.87
CDK5RAP3-204ENST00000577664 IGHV1-18A0A0C4DH31 117 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TUBAL3A6NHL2 446 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 OGG1O15527 345 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DOK2O60496 412 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MT-ND2P03891 347 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MT-ND5P03915 603 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 KRT8P05787 483 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 H2BFMP0C1H6 154 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ACSM4P0C7M7 580 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 JUNBP17275 347 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 EEF1B2P24534 225 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CCR9P51686 369 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RIDAP52758 137 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 WNT4P56705 351 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 OR12D2P58182 307 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RAB39AQ14964 217 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DAZAP2Q15038 168 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SPHARQ15513 63 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 UBE2UQ5VVX9 321 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 XAF1Q6GPH4 301 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 LRRN1Q6UXK5 716 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 Q6ZSR3 168 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 KRT77Q7Z794 578 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SVOPQ8N4V2 548 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 AKR7LQ8NHP1 331 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 FAM222BQ8WU58 562 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 FCGR1BQ92637 280 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RORBQ92753 470 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SPTSSAQ969W0 71 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PELI1Q96FA3 418 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TBX5Q99593 518 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 C1QTNF5Q9BXJ0 243 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ISG20L2Q9H9L3 353 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NPAP1Q9NZP6 1156 aa9.63□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PLPP2O43688 288 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 IGLV3-1P01715 115 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RPSAP08865 295 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CECR9P0C854 216 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 APEX1P27695 318 aaKnown RBP9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 APLNRP35414 380 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 HTR5AP47898 357 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RGS6P49758 472 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TPTEP56180 551 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TUBA1BP68363 451 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NCMAPQ5T1S8 102 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SYT6Q5T7P8 510 aaPredicted RBP9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TMEM108Q6UXF1 575 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TUBA1AQ71U36 451 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 KRT74Q7RTS7 529 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SLC30A7Q8NEW0 376 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RADILQ96JH8 1075 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 C4orf36Q96KX1 117 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 COG8Q96MW5 612 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MED18Q9BUE0 208 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MOB1AQ9H8S9 216 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SP140LQ9H930 580 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CENPMQ9NSP4 180 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 FAM206AQ9NX38 181 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 R4GMQ9 66 aa9.62□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PRR14LQ5THK1 2151 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 A0A0U1RQV5 110 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TMEM269A0A1B0GVZ9 245 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 A0A1W2PR80 420 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DPRXA6NFQ7 191 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 J3QLW9 94 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 M0R135 149 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MAGEB4O15481 346 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PNPP00491 289 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ISG15P05161 165 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CELA3BP08861 270 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SMIM18P0DKX4 95 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZNF19P17023 458 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CD53P19397 219 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DNASE1P24855 282 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CD40P25942 277 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 LOXP28300 417 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 GDI2P50395 445 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 GBX2P52951 348 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CDH15P55291 814 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TAS2R43P59537 309 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 PSMA6P60900 246 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 NAAAQ02083 359 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TPBGQ13641 420 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TBC1D28Q2M2D7 210 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ZNF829Q3KNS6 432 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 OR2G6Q5TZ20 316 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 DMKNQ6E0U4 476 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 RPL22L1Q6P5R6 122 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 TMEM154Q6P9G4 183 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 ARL9Q6T311 187 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 UNQ6126/PRO20091Q6UXV3 157 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 MYPOPQ86VE0 399 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 CATSPERDQ86XM0 798 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 OR52H1Q8NGJ2 320 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 LINC01560Q8TB33 94 aa9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 SPRYD4Q8WW59 207 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-204ENST00000577664 GATAD2BQ8WXI9 593 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms