RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 BMP4P12644 408 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 ZNF250P15622 560 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 DNASE1P24855 282 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 DCKP27707 260 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 DCTDP32321 178 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 EVX1P49640 407 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 KLF3P57682 345 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-217ENST00000575711 SNRPD2P62316 118 aaKnown RBP12.01□□□□□ -0.49
RPAIN-217ENST00000575711 ACTA2P62736 377 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 ACTG2P63267 376 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 MSMPQ1L6U9 139 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 SNAI3Q3KNW1 292 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 C6orf141Q5SZD1 244 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 MBNL2Q5VZF2 373 aaKnown RBP12.01□□□□□ -0.49
RPAIN-217ENST00000575711 LAIR2Q6ISS4 152 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 PLEKHG7Q6ZR37 379 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 FAM57BQ71RH2 274 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 YIPF7Q8N8F6 280 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 PGAM5Q96HS1 289 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 MRPL37Q9BZE1 423 aaKnown RBP12.01□□□□□ -0.49
RPAIN-217ENST00000575711 POFUT1Q9H488 388 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 CXorf56Q9H5V9 222 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 FGF20Q9NP95 211 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-217ENST00000575711 BRD7Q9NPI1 651 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 PLCXD1Q9NUJ7 323 aa12.01□□□□□ -0.49
RPAIN-217ENST00000575711 CNOT2Q9NZN8 540 aaKnown RBP12.01□□□□□ -0.49
RPAIN-217ENST00000575711 MRM2Q9UI43 246 aaKnown RBP12.01□□□□□ -0.49
RPAIN-217ENST00000575711 FBXO9Q9UK97 447 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-217ENST00000575711 ASH1LQ9NR48 2969 aaKnown RBP12.01□□□□□ -0.49
RPAIN-217ENST00000575711 HEATR1Q9H583 2144 aaKnown RBP12.01□□□□□ -0.49
RPAIN-217ENST00000575711 DCHS2Q6V1P9 2916 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 FBN2P35556 2912 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 CELSR2Q9HCU4 2923 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 TMEM269A0A1B0GVZ9 245 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 SLC1A7O00341 560 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 MAGEB4O15481 346 aaPredicted RBP12□□□□□ -0.49
RPAIN-217ENST00000575711 TBX1O43435 398 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 CD8AP01732 235 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 TACSTD2P09758 323 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 PIPP12273 146 aaPredicted RBP12□□□□□ -0.49
RPAIN-217ENST00000575711 MYL12AP19105 171 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 CD53P19397 219 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 MED21Q13503 144 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 GALEQ14376 348 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 MOGQ16653 247 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 SWI5Q1ZZU3 235 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 CDONQ4KMG0 1287 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 ZNF684Q5T5D7 378 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 C11orf71Q6IPW1 123 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 KCTD20Q7Z5Y7 419 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 CDH24Q86UP0 819 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 LHFPL3Q86UP9 236 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 LRP11Q86VZ4 500 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 ZNF540Q8NDQ6 660 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 OR52H1Q8NGJ2 320 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 GGHQ92820 318 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 NINJ1Q92982 152 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 TMEM80Q96HE8 168 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 ALG8Q9BVK2 526 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 JAM3Q9BX67 310 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 OR10A2Q9H208 303 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 CHCHD3Q9NX63 227 aaKnown RBP12□□□□□ -0.49
RPAIN-217ENST00000575711 ERVK13-1Q9NX77 482 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 SCN3BQ9NY72 215 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 PSORS1C1Q9UIG5 152 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 GPR160Q9UJ42 338 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 GNG8Q9UK08 70 aa12□□□□□ -0.49
RPAIN-217ENST00000575711 DIMT1Q9UNQ2 313 aaKnown RBP12□□□□□ -0.49
RPAIN-217ENST00000575711 RAI1Q7Z5J4 1906 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-217ENST00000575711 IGLV3-9A0A075B6K5 115 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 TMEM129A0AVI4 362 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 ACOD1A6NK06 481 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 LOC110117498-PIK3R3F6TDL0 507 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 XRCC2O43543 280 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 DENRO43583 198 aaKnown RBP11.99□□□□□ -0.49
RPAIN-217ENST00000575711 RPP14O95059 124 aaKnown RBP11.99□□□□□ -0.49
RPAIN-217ENST00000575711 CLPTM1O96005 669 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 IGHV3-13P01766 116 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 RAC2P15153 192 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 MPV17P39210 176 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 ST3GAL4Q11206 333 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 TIGD6Q17RP2 521 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 NKPD1Q17RQ9 610 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 MST1LQ2TV78 715 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 TP53I3Q53FA7 332 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 LIPNQ5VXI9 398 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 FBXW12Q6X9E4 464 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 AHSA2Q719I0 299 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 PRSS45Q7RTY3 260 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 MRPL21Q7Z2W9 205 aaKnown RBP11.99□□□□□ -0.49
RPAIN-217ENST00000575711 STX19Q8N4C7 294 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 CMBLQ96DG6 245 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 RHNO1Q9BSD3 238 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 OPA3Q9H6K4 179 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 MOB1AQ9H8S9 216 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 DYNLRB1Q9NP97 96 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 FAM206AQ9NX38 181 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 TAAR3PQ9P1P4 343 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 GTF2A1LQ9UNN4 478 aa11.99□□□□□ -0.49
RPAIN-217ENST00000575711 EXOSC1Q9Y3B2 195 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms