RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 GID4Q8IVV7 300 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 UBASH3BQ8TF42 649 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 NR1H4Q96RI1 486 aaPredicted RBP11.33□□□□□ -0.6
RPAIN-216ENST00000575599 COQ7Q99807 217 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 POFUT1Q9H488 388 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 MED20Q9H944 212 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 HINT3Q9NQE9 182 aaKnown RBP11.33□□□□□ -0.6
RPAIN-216ENST00000575599 UBAP1Q9NZ09 502 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 DNAJC27Q9NZQ0 273 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 CYB5R1Q9UHQ9 305 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 MYRFQ9Y2G1 1151 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 TPRKBQ9Y3C4 175 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 COMMD3-BMI1R4GMX3 469 aa11.33□□□□□ -0.6
RPAIN-216ENST00000575599 A0A096LNT2 108 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 C17orf100A8MU93 164 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 NDUFS8O00217 210 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 ST8SIA5O15466 376 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 ENTPD6O75354 484 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 IGHV3-13P01766 116 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 HPXP02790 462 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 MT-ND5P03915 603 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 SPARCP09486 303 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 EEF1B2P24534 225 aaKnown RBP11.32□□□□□ -0.6
RPAIN-216ENST00000575599 MAGEB1P43366 347 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 SLC25A1P53007 311 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 OCLNQ16625 522 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 MOGQ16653 247 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 LCN1P1Q5VSP4 162 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 C1orf174Q8IYL3 243 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 ZNF511Q8NB15 262 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 ZNF582Q96NG8 517 aaPredicted RBP11.32□□□□□ -0.6
RPAIN-216ENST00000575599 ATF6BQ99941 703 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 HCAR1Q9BXC0 346 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 YTHDF1Q9BYJ9 559 aaKnown RBP11.32□□□□□ -0.6
RPAIN-216ENST00000575599 NMNAT2Q9BZQ4 307 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 BPESC1Q9GZL8 116 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 OR51V1Q9H2C8 321 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 WDR76Q9H967 626 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 TBCCD1Q9NVR7 557 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 AASSQ9UDR5 926 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 ATPIF1Q9UII2 106 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 KCNG2Q9UJ96 466 aa11.32□□□□□ -0.6
RPAIN-216ENST00000575599 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.32□□□□□ -0.6
RPAIN-216ENST00000575599 RPL36Q9Y3U8 105 aaKnown RBP11.32□□□□□ -0.6
RPAIN-216ENST00000575599 CHD3Q12873 2000 aaKnown RBP11.32□□□□□ -0.6
RPAIN-216ENST00000575599 PLSCR5A0PG75 271 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 F5H5K5 113 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 H3BSA7 217 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 PRODHO43272 600 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 TPD52L2O43399 206 aaKnown RBP11.31□□□□□ -0.6
RPAIN-216ENST00000575599 TIMM8AO60220 97 aaPredicted RBP11.31□□□□□ -0.6
RPAIN-216ENST00000575599 NCR1O76036 304 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 RPSAP08865 295 aaKnown RBP11.31□□□□□ -0.6
RPAIN-216ENST00000575599 PSKH1P11801 424 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 USF1P22415 310 aaPredicted RBP11.31□□□□□ -0.6
RPAIN-216ENST00000575599 ATP6V1E1P36543 226 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 NR4A2P43354 598 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 ENTPD1P49961 510 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 ZNF81P51508 661 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 CXCR4P61073 352 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 CCL8P80075 99 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 TSTQ16762 297 aaKnown RBP11.31□□□□□ -0.6
RPAIN-216ENST00000575599 SLC25A30Q5SVS4 291 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 NXNL2Q5VZ03 156 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 ZNF540Q8NDQ6 660 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 FBLIM1Q8WUP2 373 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 MAP6Q96JE9 813 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 DCLRE1CQ96SD1 692 aaKnown RBP11.31□□□□□ -0.6
RPAIN-216ENST00000575599 PNRC2Q9NPJ4 139 aaKnown RBP11.31□□□□□ -0.6
RPAIN-216ENST00000575599 PTTG3PQ9NZH4 202 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 STARD10Q9Y365 291 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 MTORP42345 2549 aa11.31□□□□□ -0.6
RPAIN-216ENST00000575599 IRGMA1A4Y4 181 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 SLC22A31A6NKX4 558 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 VWC2LB2RUY7 222 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 SPRY3O43610 288 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 CCDC159P0C7I6 412 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 GABRB1P18505 474 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 RGS6P49758 472 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 RIPPLY3P57055 190 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 EFNB1P98172 346 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 KRTAP1-1Q07627 177 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 LOXL1Q08397 574 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-216ENST00000575599 PSG7Q13046 419 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 APOFQ13790 326 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 TMEM249Q2WGJ8 235 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 MEPCEQ7L2J0 689 aaKnown RBP11.3□□□□□ -0.6
RPAIN-216ENST00000575599 DCXRQ7Z4W1 244 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 BCDIN3DQ7Z5W3 292 aaKnown RBP11.3□□□□□ -0.6
RPAIN-216ENST00000575599 APH1BQ8WW43 257 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 APOBEC3DQ96AK3 386 aaPredicted RBP11.3□□□□□ -0.6
RPAIN-216ENST00000575599 CMBLQ96DG6 245 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 COG8Q96MW5 612 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 DECR2Q9NUI1 292 aa11.3□□□□□ -0.6
RPAIN-216ENST00000575599 IGHV4-61A0A0C4DH41 118 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 MAGEA13PA6NCF6 341 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 EFCAB10A6NFE3 127 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 ZSCAN5BA6NJL1 495 aa11.29□□□□□ -0.6
RPAIN-216ENST00000575599 PTGES3LE9PB15 166 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms