RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ST3GAL2Q16842 350 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 LINC00303Q3SY05 128 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 ABHD17BQ5VST6 288 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 CD276Q5ZPR3 534 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 LYPD6Q86Y78 171 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 OR11H7Q8NGC8 314 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 ITFG2Q969R8 447 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 NABP1Q96AH0 204 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 INTS12Q96CB8 462 aaKnown RBP12.4□□□□□ -0.43
VPS33B-208ENST00000574755 FAM71F1Q96KD3 344 aaPredicted RBP12.4□□□□□ -0.43
VPS33B-208ENST00000574755 ZFP64Q9NPA5 681 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF319Q9P2F9 582 aa12.4□□□□□ -0.43
VPS33B-208ENST00000574755 ARPC1BO15143 372 aaKnown RBP12.39□□□□□ -0.43
VPS33B-208ENST00000574755 CXCL13O43927 109 aa12.39□□□□□ -0.43
VPS33B-208ENST00000574755 ABOP16442 354 aa12.39□□□□□ -0.43
VPS33B-208ENST00000574755 POU3F2P20265 443 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-208ENST00000574755 CD96P40200 585 aa12.39□□□□□ -0.43
VPS33B-208ENST00000574755 GZMKP49863 264 aa12.39□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF84P51523 738 aa12.39□□□□□ -0.43
VPS33B-208ENST00000574755 CAPZA1P52907 286 aa12.39□□□□□ -0.43
VPS33B-208ENST00000574755 ENDOGQ14249 297 aaKnown RBP12.39□□□□□ -0.43
VPS33B-208ENST00000574755 JMJD6Q6NYC1 403 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-208ENST00000574755 SLC22A24Q8N4F4 322 aa12.39□□□□□ -0.43
VPS33B-208ENST00000574755 SOX7Q9BT81 388 aa12.39□□□□□ -0.43
VPS33B-208ENST00000574755 METTL17Q9H7H0 456 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-208ENST00000574755 NOX3Q9HBY0 568 aa12.39□□□□□ -0.43
VPS33B-208ENST00000574755 BOKQ9UMX3 212 aaPredicted RBP12.39□□□□□ -0.43
VPS33B-208ENST00000574755 LDLRAD4O15165 306 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 SSNA1O43805 119 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 TNFSF15O95150 251 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 FCER2P06734 321 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 GTF2F2P13984 249 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 ANOS1P23352 680 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 ITGA3P26006 1051 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 RCVRNP35243 200 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 CASRP41180 1078 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 SUCLG1P53597 346 aaKnown RBP12.38□□□□□ -0.43
VPS33B-208ENST00000574755 FOXL2NBQ6ZUU3 175 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 CDH24Q86UP0 819 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 OR10D3Q8NH80 312 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 DEDD2Q8WXF8 326 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 ROBO4Q8WZ75 1007 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 NKD1Q969G9 470 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 TMEM246Q9BRR3 403 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 B3GNT4Q9C0J1 378 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 RHBDD3Q9Y3P4 386 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 FLVCR1Q9Y5Y0 555 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 F5H5K5 113 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 TERTO14746 1132 aaKnown RBP12.38□□□□□ -0.43
VPS33B-208ENST00000574755 RGS13O14921 159 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 ERCC1P07992 297 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-208ENST00000574755 SLC6A9P48067 706 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 SPEM2Q0P670 501 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 PMPCAQ10713 525 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 DCAF10Q5QP82 559 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 FGD2Q7Z6J4 655 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 LIX1LQ8IVB5 337 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 C20orf196Q8IYI0 205 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 OR4C16Q8NGL9 310 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 PTX4Q96A99 478 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF837Q96EG3 531 aaPredicted RBP12.38□□□□□ -0.43
VPS33B-208ENST00000574755 SIGLEC12Q96PQ1 595 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 UQCC2Q9BRT2 126 aa12.38□□□□□ -0.43
VPS33B-208ENST00000574755 MRPS18CQ9Y3D5 142 aaKnown RBP12.38□□□□□ -0.43
VPS33B-208ENST00000574755 OR5H15A6NDH6 313 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 PRAF2O60831 178 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 NEURL1O76050 574 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ANXA3P12429 323 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 CXCL3P19876 107 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF93P35789 620 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-208ENST00000574755 FOXO1Q12778 655 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 SLC25A25Q6KCM7 469 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF529Q6P280 563 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ZNF782Q6ZMW2 699 aaPredicted RBP12.37□□□□□ -0.43
VPS33B-208ENST00000574755 OR2V1Q8NHB1 315 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 PGAM5Q96HS1 289 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 UTP23Q9BRU9 249 aaKnown RBP12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ZMAT3Q9HA38 289 aaKnown RBP12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ABI3Q9P2A4 366 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 PCDHGA1Q9Y5H4 931 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 CELSR3Q9NYQ7 3312 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 A0A0A6YYH2 397 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 METTL21EPA6NDL7 271 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 A6NJ64 397 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 STMND1H3BQB6 276 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 FABP7O15540 132 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 NDUFB6O95139 128 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 HPXP02790 462 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 RAB6AP20340 208 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 CTSSP25774 331 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 RFC3P40938 356 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ACTBP60709 375 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ACTG1P63261 375 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 HYAL4Q2M3T9 481 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 MOGAT2Q3SYC2 334 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 AWAT2Q6E213 333 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 PGAP1Q75T13 922 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 DOK3Q7L591 496 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 NAA40Q86UY6 237 aa12.37□□□□□ -0.43
VPS33B-208ENST00000574755 ASCC1Q8N9N2 400 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms