RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 AKR1C2P52895 323 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 AKR1C1Q04828 323 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 OR7A5Q15622 319 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 PTCRAQ6ISU1 281 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-206ENST00000573852 C16orf47Q6ZP98 133 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-206ENST00000573852 DEFB119Q8N690 84 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 ZNF441Q8N8Z8 693 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 OR1M1Q8NGA1 313 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 OR5AP2Q8NGF4 316 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 OR1N1Q8NGS0 311 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 SELENOIQ9C0D9 397 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 COPS7AQ9UBW8 275 aa16.98■□□□□ 0.31
SCARF1-206ENST00000573852 PHF3Q92576 2039 aaKnown RBP16.97■□□□□ 0.31
SCARF1-206ENST00000573852 A6NIZ1 184 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 SHISA7A6NL88 538 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 ABCD4O14678 606 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 ZNF217O75362 1048 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 PMP2P02689 132 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 RAP1BP61224 184 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 RAP1AP62834 184 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 DEGS2Q6QHC5 323 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 OR2I1PQ8NGU4 316 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 SLC7A5P2Q9GIP4 190 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 MKL2Q9ULH7 1088 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 SLC5A6Q9Y289 635 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 C13orf42A0A1B0GVH6 325 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 ZNF208O43345 1280 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 ATG12O94817 140 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 BPNT1O95861 308 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 PGAM2P15259 253 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 FAHD2BQ6P2I3 314 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-206ENST00000573852 DNM1P34Q6PK57 102 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 SLC22A24Q8N4F4 322 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 MARCH1Q8TCQ1 289 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 FAHD2AQ96GK7 314 aa16.97■□□□□ 0.31
SCARF1-206ENST00000573852 C8orf33Q9H7E9 229 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-206ENST00000573852 C5orf51A6NDU8 294 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 DUS4LO95620 317 aaKnown RBP16.96■□□□□ 0.31
SCARF1-206ENST00000573852 FOXL2P58012 376 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 POU3F1Q03052 451 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-206ENST00000573852 LANCL3Q6ZV70 420 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 CCDC36Q8IYA8 594 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 OR10Z1Q8NGY1 313 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 NICN1Q9BSH3 213 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 DUSP15Q9H1R2 295 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-206ENST00000573852 PURGQ9UJV8 347 aaKnown RBP16.96■□□□□ 0.31
SCARF1-206ENST00000573852 DBX1A6NMT0 343 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 GPR31O00270 319 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 SYT7O43581 403 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 CRHP06850 196 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 PSMB6P28072 239 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 SERPINF1P36955 418 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 DEFB133Q30KQ1 61 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 OR13C9Q8NGT0 318 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 OR1L3Q8NH93 324 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 CYYR1Q96J86 154 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 PBOV1Q9GZY1 135 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 CHRNA10Q9GZZ6 450 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 CHMP1AQ9HD42 196 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-206ENST00000573852 SLC39A1Q9NY26 324 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 CSAG2Q9Y5P2 127 aa16.96■□□□□ 0.31
SCARF1-206ENST00000573852 TMEM218A2RU14 115 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 IFNA6P05013 189 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 ZP4Q12836 540 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 C1orf189Q5VU69 101 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 UQCC3Q6UW78 93 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 TMPPEQ6ZT21 453 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 H1FNTQ75WM6 255 aaPredicted RBP16.95■□□□□ 0.3
SCARF1-206ENST00000573852 GKN2Q86XP6 184 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 OR10R2Q8NGX6 335 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 C11orf40Q8WZ69 217 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 SLAMF6Q96DU3 332 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 PIK3IP1Q96FE7 263 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 SPACA5Q96QH8 159 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 EMC6Q9BV81 110 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 VN1R1Q9GZP7 353 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 WBP1LQ9NX94 342 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 RAB19A4D1S5 217 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 FGF16O43320 207 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 NME1P15531 152 aaKnown RBP16.95■□□□□ 0.3
SCARF1-206ENST00000573852 FBLP22087 321 aaKnown RBP16.95■□□□□ 0.3
SCARF1-206ENST00000573852 DAP3P51398 398 aaKnown RBP16.95■□□□□ 0.3
SCARF1-206ENST00000573852 CLDN6P56747 220 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 HSF1Q00613 529 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 DTWD2Q8NBA8 298 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 OR4K17Q8NGC6 315 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 OR10S1Q8NGN2 331 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 ZDHHC12Q96GR4 267 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 RNF126Q9BV68 326 aa16.95■□□□□ 0.3
SCARF1-206ENST00000573852 ATXN7L1Q9ULK2 861 aaPredicted RBP16.95■□□□□ 0.3
SCARF1-206ENST00000573852 ADCYAP1P18509 176 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 COX15Q7KZN9 410 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 HOGA1Q86XE5 327 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 ANGPTL5Q86XS5 388 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 PUSL1Q8N0Z8 303 aaKnown RBP16.94■□□□□ 0.3
SCARF1-206ENST00000573852 WNT2BQ93097 391 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 MVB12AQ96EY5 273 aa16.94■□□□□ 0.3
SCARF1-206ENST00000573852 RRNAD1Q96FB5 475 aaKnown RBP16.94■□□□□ 0.3
SCARF1-206ENST00000573852 TSNAXQ99598 290 aaKnown RBP16.94■□□□□ 0.3
SCARF1-206ENST00000573852 UQCC2Q9BRT2 126 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms