RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ANPEPP15144 967 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 HNF1AP20823 631 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 GSTM3P21266 225 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 ATP6V1B2P21281 511 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 MAGEA2P43356 314 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 CDH15P55291 814 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 HIST1H3AP68431 136 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 PPP1R8Q12972 351 aaKnown RBP6.31□□□□□ -1.4
NUP88-205ENST00000572809 PSG7Q13046 419 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 MEP1BQ16820 701 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 CR1LQ2VPA4 569 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 SLC36A3Q495N2 470 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 FAM98BQ52LJ0 330 aaKnown RBP6.31□□□□□ -1.4
NUP88-205ENST00000572809 TMEM255AQ5JRV8 349 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 HIST2H3PS2Q5TEC6 136 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 LCN8Q6JVE9 175 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 RPL13AP3Q6NVV1 102 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 RFPL4BQ6ZWI9 263 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 HIST2H3AQ71DI3 136 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.31□□□□□ -1.4
NUP88-205ENST00000572809 NPEPL1Q8NDH3 523 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 OR52E2Q8NGJ4 325 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 OR2AJ1Q8NGZ0 328 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 CLDND2Q8NHS1 167 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 SLC7A6Q92536 515 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 CCL17Q92583 94 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 POP5Q969H6 163 aaKnown RBP6.31□□□□□ -1.4
NUP88-205ENST00000572809 HAVCR1Q96D42 359 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 ELMOD3Q96FG2 381 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 C16orf92Q96LL3 132 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 DCLRE1CQ96SD1 692 aaKnown RBP6.31□□□□□ -1.4
NUP88-205ENST00000572809 DIRC2Q96SL1 478 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 EGLN1Q9GZT9 426 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 MAGIXQ9H6Y5 334 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 EGLN3Q9H6Z9 239 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 SAP30LQ9HAJ7 183 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 MSL2Q9HCI7 577 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 RPRD1BQ9NQG5 326 aaKnown RBP6.31□□□□□ -1.4
NUP88-205ENST00000572809 TAS2R1Q9NYW7 299 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 IL20Q9NYY1 176 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 TREM2Q9NZC2 230 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 PRPF19Q9UMS4 504 aaKnown RBP6.31□□□□□ -1.4
NUP88-205ENST00000572809 OR6C68A6NDL8 312 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 OR6C6A6NF89 314 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 ZSCAN5BA6NJL1 495 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 FAM157AC9JC47 383 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 CLDN25C9JDP6 229 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 BHLHE40O14503 412 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 HLA-DQA2P01906 255 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 TFP02787 698 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 GAAP10253 952 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 ZNF823P16415 610 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 SRD5A1P18405 259 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 KITLGP21583 273 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 THBS2P35442 1172 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 RGS6P49758 472 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 DVL1P1P54792 670 aaPredicted RBP6.3□□□□□ -1.4
NUP88-205ENST00000572809 ERVFRD-1P60508 538 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 LMO4P61968 165 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 TNFAIP6P98066 277 aaPredicted RBP6.3□□□□□ -1.4
NUP88-205ENST00000572809 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.3□□□□□ -1.4
NUP88-205ENST00000572809 SLC3A1Q07837 685 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 DBPQ10586 325 aaPredicted RBP6.3□□□□□ -1.4
NUP88-205ENST00000572809 COX10Q12887 443 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 TRAP1Q12931 704 aaKnown RBP6.3□□□□□ -1.4
NUP88-205ENST00000572809 MICAQ29983 383 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 ZMAT1Q5H9K5 638 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 CLEC12AQ5QGZ9 265 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 AVPI1Q5T686 147 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 OR2T5Q6IEZ7 315 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 ZNF770Q6IQ21 691 aaPredicted RBP6.3□□□□□ -1.4
NUP88-205ENST00000572809 CORO6Q6QEF8 472 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 ZNF620Q6ZNG0 422 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 RASSF6Q6ZTQ3 369 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 IL17RELQ6ZVW7 336 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 SDR9C7Q8NEX9 313 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 SLC26A10Q8NG04 563 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 OR9Q2Q8NGE9 314 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 OR52L1Q8NGH7 329 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 OR5L1Q8NGL2 311 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 OR4C15Q8NGM1 316 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 OR2T29Q8NH02 315 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 RAB1CQ92928 201 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 ASB9Q96DX5 294 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 TIMD4Q96H15 378 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 LRGUKQ96M69 825 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 DDOQ99489 341 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 COQ7Q99807 217 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 BTBD10Q9BSF8 475 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 THTPAQ9BU02 230 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 TSSK6Q9BXA6 273 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 HDHD2Q9H0R4 259 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 POFUT1Q9H488 388 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 ZMAT4Q9H898 229 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 REEP1Q9H902 201 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 TCF7L1Q9HCS4 588 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 ATPIF1Q9UII2 106 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 PURGQ9UJV8 347 aaKnown RBP6.3□□□□□ -1.4
NUP88-205ENST00000572809 POLR1DQ9Y2S0 133 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 270.8 ms