RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ATP6V1B1P15313 513 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 OR12D2P58182 307 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 ACTA2P62736 377 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 ACTG2P63267 376 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 SCRN3Q0VDG4 424 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 RSPO1Q2MKA7 263 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-209ENST00000571558 KRTAP27-1Q3LI81 207 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 KRTAP24-1Q3LI83 254 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 SLC36A2Q495M3 483 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 TP53I3Q53FA7 332 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 UBE2UQ5VVX9 321 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 KCTD18Q6PI47 426 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-209ENST00000571558 DEGS2Q6QHC5 323 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 LRRN1Q6UXK5 716 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 KCTD8Q6ZWB6 473 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 VASH1Q7L8A9 365 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-209ENST00000571558 KCTD20Q7Z5Y7 419 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 DPPA2Q7Z7J5 298 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 CCDC36Q8IYA8 594 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 ZNF679Q8IYX0 411 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 KLHL36Q8N4N3 616 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 SNX33Q8WV41 574 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 FBXW5Q969U6 566 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 OR5M11Q96RB7 305 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 MND1Q9BWT6 205 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 CHCHD3Q9NX63 227 aaKnown RBP11.88□□□□□ -0.51
RPAIN-209ENST00000571558 METTL15A6NJ78 407 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 PSMD9O00233 223 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 SGCEO43556 437 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 SYNGR3O43761 229 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 ZNF254O75437 659 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 SULT1C4O75897 302 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 UBL3O95164 117 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 LALBAP00709 142 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 LCKP06239 509 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 JUNBP17275 347 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-209ENST00000571558 ARR3P36575 388 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 WNT4P56705 351 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 RAB1AP62820 205 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 TUBA1BP68363 451 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 RAB35Q15286 201 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 SPHARQ15513 63 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 PABPC1L2AQ5JQF8 200 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 ELFN2Q5R3F8 820 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 TMEM154Q6P9G4 183 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 TMPRSS11AQ6ZMR5 421 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 PLEKHG7Q6ZR37 379 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 TUBA1AQ71U36 451 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 S100PBPQ96BU1 408 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 PELI1Q96FA3 418 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 C4orf36Q96KX1 117 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 BEX2Q9BXY8 128 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 KCNN2Q9H2S1 579 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 RNF115Q9Y4L5 304 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 LRP12Q9Y561 859 aa11.87□□□□□ -0.51
RPAIN-209ENST00000571558 ZNF878C9JN71 531 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 J3QLW9 94 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 MYL12BO14950 172 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 SRSF10O75494 262 aaKnown RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 CLPTM1O96005 669 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 MT-ND5P03915 603 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 KRT8P05787 483 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 CD79AP11912 226 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ZNF19P17023 458 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 IL32P24001 234 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 OTX1P32242 354 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ACSM1Q08AH1 577 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 GSG1Q2KHT4 349 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 TIMM23BQ5SRD1 257 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 C1QTNF12Q5T7M4 302 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 LIPNQ5VXI9 398 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ZNF774Q6NX45 483 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 SPATC1Q76KD6 591 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 MDP1Q86V88 176 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 P2RY8Q86VZ1 359 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ZNF584Q8IVC4 421 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 CPEB3Q8NE35 698 aaKnown RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 STEAP2Q8NFT2 490 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 AKR7LQ8NHP1 331 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 SPRYD4Q8WW59 207 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 GATAD2BQ8WXI9 593 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 FCGR1BQ92637 280 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 MUL1Q969V5 352 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 MRPL48Q96GC5 212 aaKnown RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 COG8Q96MW5 612 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ATF6BQ99941 703 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 USB1Q9BQ65 265 aaKnown RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 C19orf24Q9BVV8 132 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 HDHD2Q9H0R4 259 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ESRP2Q9H6T0 727 aaKnown RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ELOVL3Q9HB03 270 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 OBP2BQ9NPH6 170 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ACOXLQ9NUZ1 547 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 BABAM2Q9NXR7 383 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ATPIF1Q9UII2 106 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 GNG8Q9UK08 70 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 AMDHD2Q9Y303 409 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 SLC25A15Q9Y619 301 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms