RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ABHD16AO95870 558 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 NGFP01138 241 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 COX5BP10606 129 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 HTR1FP30939 366 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 CAPGP40121 348 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 WNT5AP41221 380 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 SLC6A9P48067 706 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 PDLIM4P50479 330 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 UCP2P55851 309 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 SNRPGP62308 76 aaKnown RBP11.41□□□□□ -0.58
CCDC40-205ENST00000571028 ADARB1P78563 741 aaKnown RBP11.41□□□□□ -0.58
CCDC40-205ENST00000571028 CARTPTQ16568 116 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 CR1LQ2VPA4 569 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 TEX30Q5JUR7 227 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 C11orf71Q6IPW1 123 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.41□□□□□ -0.58
CCDC40-205ENST00000571028 SLC35F2Q8IXU6 374 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 ZNF101Q8IZC7 436 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 CNIH3Q8TBE1 160 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 TRUB1Q8WWH5 349 aaKnown RBP11.41□□□□□ -0.58
CCDC40-205ENST00000571028 RFKQ969G6 155 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 AMELYQ99218 206 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 SYT3Q9BQG1 590 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 AMBNQ9NP70 447 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 PNRC2Q9NPJ4 139 aaKnown RBP11.41□□□□□ -0.58
CCDC40-205ENST00000571028 WARS2Q9UGM6 360 aaKnown RBP11.41□□□□□ -0.58
CCDC40-205ENST00000571028 DUSP13Q9UII6 198 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 NDUFS8O00217 210 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 MPZL2O60487 215 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 LYNP07948 512 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 H2BFMP0C1H6 154 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 OR4A8P0C604 315 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 HSD11B1P28845 292 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 APOBEC3AP31941 199 aaPredicted RBP11.4□□□□□ -0.58
CCDC40-205ENST00000571028 RAD52P43351 418 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 ADIPOQQ15848 244 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 OCLNQ16625 522 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 ZNF691Q5VV52 312 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 MEDAGQ5VYS4 303 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 RGS7BPQ6MZT1 257 aaPredicted RBP11.4□□□□□ -0.58
CCDC40-205ENST00000571028 ARL9Q6T311 187 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 IZUMO2Q6UXV1 221 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 RFPL4BQ6ZWI9 263 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 KRT77Q7Z794 578 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 NAA40Q86UY6 237 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 ZNF283Q8N7M2 679 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 NUP37Q8NFH4 326 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 OR10H4Q8NGA5 316 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 RHOXF1Q8NHV9 184 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 OTOSQ8NHW6 89 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 ST7LQ8TDW4 575 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 SPTSSAQ969W0 71 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 RNFT2Q96EX2 444 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 COQ7Q99807 217 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 YIPF3Q9GZM5 350 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 OCEL1Q9H607 264 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 ADGRL4Q9HBW9 690 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 BRD7Q9NPI1 651 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 COPS3Q9UNS2 423 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 CMAHPQ9Y471 501 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 SVEP1Q4LDE5 3571 aa11.4□□□□□ -0.58
CCDC40-205ENST00000571028 ZNF878C9JN71 531 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF670-ZNF695F2Z2N8 137 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 M0R135 149 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 MAGEB4O15481 346 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-205ENST00000571028 LCATP04180 440 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 GNAO1P09471 354 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 SLC2A1P11166 492 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 GABRB1P18505 474 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 ALOX5APP20292 161 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 SERPINF1P36955 418 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 NR4A2P43354 598 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 MTNR1AP48039 350 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 TPTEP56180 551 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 PPP1CBP62140 327 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 RPS23P62266 143 aaKnown RBP11.39□□□□□ -0.59
CCDC40-205ENST00000571028 ECH1Q13011 328 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 MAD2L1BPQ15013 274 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-205ENST00000571028 SMN1Q16637 294 aaKnown RBP11.39□□□□□ -0.59
CCDC40-205ENST00000571028 PCK2Q16822 640 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 MSMPQ1L6U9 139 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 ALKBH6Q3KRA9 238 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF544Q6NX49 715 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 LRRN1Q6UXK5 716 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 C8orf59Q8N0T1 100 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 SETD9Q8NE22 299 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 SLC25A40Q8TBP6 338 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 ZNF799Q96GE5 643 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 Q96MT0 163 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 POFUT1Q9H488 388 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 ELOVL3Q9HB03 270 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 PTTG3PQ9NZH4 202 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 IKZF2Q9UKS7 526 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC40-205ENST00000571028 STARD10Q9Y365 291 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 CADP27708 2225 aa11.39□□□□□ -0.59
CCDC40-205ENST00000571028 HEATR1Q9H583 2144 aaKnown RBP11.38□□□□□ -0.59
CCDC40-205ENST00000571028 A0A1W2PPW3 197 aa11.38□□□□□ -0.59
CCDC40-205ENST00000571028 SNTNA6NMZ2 147 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms