RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 AQP11Q8NBQ7 271 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR2T4Q8NH00 348 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 SPTSSAQ969W0 71 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 NSL1Q96IY1 281 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 CCT8L2Q96SF2 557 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 C1QTNF5Q9BXJ0 243 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 MAGIXQ9H6Y5 334 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 C7orf69Q9H7B7 122 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 REEP1Q9H902 201 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 GCM1Q9NP62 436 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 CYB5R1Q9UHQ9 305 aa10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 SAMHD1Q9Y3Z3 626 aaKnown RBP10.42□□□□□ -0.74
CTDNEP1-205ENST00000570828 TCRBV5S2A0A599 114 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 IQCF6A8MYZ5 107 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 BHLHE40O14503 412 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 VENTXO95231 258 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 LCATP04180 440 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 ACSM4P0C7M7 580 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 ADRA2CP18825 462 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 CALB2P22676 271 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 PYCR1P32322 319 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 MDH2P40926 338 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 TPTEP56180 551 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 KRTAP27-1Q3LI81 207 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 C4orf46Q504U0 113 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 FAM98BQ52LJ0 330 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 LCN8Q6JVE9 175 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 COLCA1Q6ZS62 124 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 C1orf229Q6ZS94 237 aaPredicted RBP10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 RASSF6Q6ZTQ3 369 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 CCDC197Q8NCU1 140 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 SEMA6DQ8NFY4 1073 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR4C15Q8NGM1 316 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 NANPQ8TBE9 248 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 POP5Q969H6 163 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 MEGF10Q96KG7 1140 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 SIGLEC11Q96RL6 698 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 SLC30A2Q9BRI3 323 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 PLA2G12AQ9BZM1 189 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 MRPL22Q9NWU5 206 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 IL20Q9NYY1 176 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 U3KQV3 271 aa10.41□□□□□ -0.74
CTDNEP1-205ENST00000570828 PPIAL4EA0A075B759 164 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 PPIAL4CA0A0B4J2A2 164 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 TVP23AA6NH52 213 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 LRRC30A6NM36 301 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 PPIAL4DF5H284 164 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 TMEM178BH3BS89 294 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 M0R135 149 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 SOX14O95416 240 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 FAM107AO95990 144 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 GASTP01350 101 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 PPIAL4FP0DN26 164 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 RBMXP38159 391 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 SLC6A9P48067 706 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 TRIM25Q14258 630 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 GK2Q14410 553 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 RSPO1Q2MKA7 263 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 ESCO2Q56NI9 601 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR2T5Q6IEZ7 315 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 ZNF770Q6IQ21 691 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 USP43Q70EL4 1123 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 PGAP1Q75T13 922 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 MRPL21Q7Z2W9 205 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 LRRC28Q86X40 367 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 BPIFB2Q8N4F0 458 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 SLC37A3Q8NCC5 494 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR2T33Q8NG76 320 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR8D4Q8NGM9 314 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR9Q1Q8NGQ5 310 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 OR2T29Q8NH02 315 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 ZFAND2BQ8WV99 257 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 CCDC124Q96CT7 223 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 ZNF799Q96GE5 643 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 MAP6Q96JE9 813 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 LRGUKQ96M69 825 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 JMJD8Q96S16 334 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 SUCNR1Q9BXA5 334 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 TSSK6Q9BXA6 273 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 PATZ1Q9HBE1 687 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 PNRC2Q9NPJ4 139 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 TMEM100Q9NV29 134 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 PRPF19Q9UMS4 504 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 BAIAP2Q9UQB8 552 aa10.4□□□□□ -0.74
CTDNEP1-205ENST00000570828 IGHV3-64DA0A0J9YX35 117 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 CEACAM18A8MTB9 384 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 F5H5P2 479 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 H0YL77 283 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 MLNRO43193 412 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 CYB5R3P00387 301 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 IFNGP01579 166 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 SPARCP09486 303 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 RPS2P15880 293 aaKnown RBP10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 ZFP36P26651 326 aaKnown RBP10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 RPS27P42677 84 aaKnown RBP10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 RAD23AP54725 363 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 HILS1P60008 231 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 ACTG1P63261 375 aa10.39□□□□□ -0.75
CTDNEP1-205ENST00000570828 PPP1R8Q12972 351 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms