RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 LRCH1Q9Y2L9 728 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 F5H5K5 113 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 M0R135 149 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 VENTXO95231 258 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 HLA-DQA2P01906 255 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SBK2P0C263 348 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ZNF823P16415 610 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ADRA2CP18825 462 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ZFP36P26651 326 aaKnown RBP14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 BLVRAP53004 296 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 TPTEP56180 551 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 MS4A2Q01362 244 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 MALLQ13021 153 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 FAM98BQ52LJ0 330 aaKnown RBP14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR5AS1Q8N127 324 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ATG16L2Q8NAA4 619 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 AQP11Q8NBQ7 271 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SLC37A3Q8NCC5 494 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CCDC197Q8NCU1 140 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PROKR2Q8NFJ6 384 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 Q8TCH9 128 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ZNF799Q96GE5 643 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SLC22A4Q9H015 551 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OCEL1Q9H607 264 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 REEP1Q9H902 201 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 TMEM100Q9NV29 134 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 UBAP1Q9NZ09 502 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PCDHB10Q9UN67 800 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 NOP16Q9Y3C1 178 aaKnown RBP14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 COMMD3-BMI1R4GMX3 469 aa14.36□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PTBP3O95758 552 aaKnown RBP14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PPIAL4GP0DN37 164 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 RAP2AP10114 183 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CD200P41217 278 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 LCN2P80188 198 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 DRAM2Q6UX65 266 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CYB561A3Q8NBI2 242 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 DEFB108BQ8NET1 73 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR2T33Q8NG76 320 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR10AD1Q8NGE0 317 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SPTSSAQ969W0 71 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 JMJD8Q96S16 334 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SUCNR1Q9BXA5 334 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 C7orf69Q9H7B7 122 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 TBC1D23Q9NUY8 699 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 VNN3Q9NY84 501 aa14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SAMHD1Q9Y3Z3 626 aaKnown RBP14.35□□□□□ -0.11
MAP1LC3B-208ENST00000570189 H0YL77 283 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ACOT8O14734 319 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 LCATP04180 440 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 WNT2P09544 360 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ZNF12P17014 697 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PYCR1P32322 319 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 COMPP49747 757 aaPredicted RBP14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 RAD23AP54725 363 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PAX2Q02962 417 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 DBPQ10586 325 aaPredicted RBP14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PGAP1Q75T13 922 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 RHOUQ7L0Q8 258 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 C1orf87Q8N0U7 546 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PLPP7Q8NBV4 271 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 FAM216AQ8WUB2 273 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ZNRF4Q8WWF5 429 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 DVL3Q92997 716 aaPredicted RBP14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 TSSK6Q9BXA6 273 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OPA3Q9H6K4 179 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 TMEM165Q9HC07 324 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CMC2Q9NRP2 79 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 TAS2R1Q9NYW7 299 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 INSIG2Q9Y5U4 225 aa14.34□□□□□ -0.11
MAP1LC3B-208ENST00000570189 AQP12BA6NM10 295 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 LRRC30A6NM36 301 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 CEACAM18A8MTB9 384 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 TRAPPC2LH3BP13 241 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SPI1P17947 270 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 FMO3P31513 532 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ENTPD1P49961 510 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZNF154Q13106 437 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 MAB21L1Q13394 359 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 CRMP1Q14194 572 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ESCO2Q56NI9 601 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 NAA40Q86UY6 237 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 AQP12AQ8IXF9 295 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 OR4Q3Q8NH05 313 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 DACT3Q96B18 629 aaPredicted RBP14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 MARCH7Q9H992 704 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 MIOXQ9UGB7 285 aa14.33□□□□□ -0.12
MAP1LC3B-208ENST00000570189 F5H5P2 479 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 GMDSO60547 372 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 IFNGP01579 166 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 PSKH1P11801 424 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 SEC61A1P61619 476 aaKnown RBP14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 HNRNPA0Q13151 305 aaKnown RBP14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 ZNF404Q494X3 552 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 LINC01590Q5TEZ4 76 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 DCXRQ7Z4W1 244 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 KLBQ86Z14 1044 aa14.32□□□□□ -0.12
MAP1LC3B-208ENST00000570189 BHLHE23Q8NDY6 225 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms