RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 KIF17Q9P2E2 1029 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 LPAR3Q9UBY5 353 aa11.03□□□□□ -0.64
CNOT1-220ENST00000569916 A0A1B0GWJ7 208 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 ZNF878C9JN71 531 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 PRR23D1E9PI22 279 aaPredicted RBP11.02□□□□□ -0.65
CNOT1-220ENST00000569916 MLNRO43193 412 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 FAM157CP0CG43 387 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 PRR23D2P0DMB1 279 aaPredicted RBP11.02□□□□□ -0.65
CNOT1-220ENST00000569916 PAICSP22234 425 aaKnown RBP11.02□□□□□ -0.65
CNOT1-220ENST00000569916 TNFSF4P23510 183 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 GSTT1P30711 240 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 RBMXP38159 391 aaKnown RBP11.02□□□□□ -0.65
CNOT1-220ENST00000569916 SLC6A9P48067 706 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 DAPP51397 102 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 SNAI3Q3KNW1 292 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 FAM120AOSQ5T036 256 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 TMEM236Q5W0B7 351 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 PLBD1Q6P4A8 553 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 DRAM2Q6UX65 266 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 IL17RELQ6ZVW7 336 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 ASRGL1Q7L266 308 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 ERI1Q8IV48 349 aaKnown RBP11.02□□□□□ -0.65
CNOT1-220ENST00000569916 TIGD4Q8IY51 512 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 PARP8Q8N3A8 854 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 ZNF283Q8N7M2 679 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 BHLHE23Q8NDY6 225 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 OR10AD1Q8NGE0 317 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 OR6N2Q8NGY6 317 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 ITLN1Q8WWA0 313 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 OTULINQ96BN8 352 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 TIMD4Q96H15 378 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 ZNF582Q96NG8 517 aaPredicted RBP11.02□□□□□ -0.65
CNOT1-220ENST00000569916 OR2V2Q96R30 315 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 SLC30A2Q9BRI3 323 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 SHARPINQ9H0F6 387 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 OR51V1Q9H2C8 321 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 ZNF665Q9H7R5 613 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 PAPOLBQ9NRJ5 636 aaKnown RBP11.02□□□□□ -0.65
CNOT1-220ENST00000569916 IL19Q9UHD0 177 aa11.02□□□□□ -0.65
CNOT1-220ENST00000569916 JMJD1CQ15652 2540 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 C5orf63A6NC05 138 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 B4DSR2 109 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 H0YL77 283 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 PRODHO43272 600 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 HMGN1P05114 100 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 SELEP16581 610 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 TNFRSF1AP19438 455 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 FASP25445 335 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 PRKXP51817 358 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 CRISP1P54107 249 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 DVL1P1P54792 670 aaPredicted RBP11.01□□□□□ -0.65
CNOT1-220ENST00000569916 SLC3A1Q07837 685 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 MALLQ13021 153 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 EIF2B1Q14232 305 aaKnown RBP11.01□□□□□ -0.65
CNOT1-220ENST00000569916 CR1LQ2VPA4 569 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 PGAP1Q75T13 922 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 DPY19L4Q7Z388 723 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 CPOQ8IVL8 374 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 BBS1Q8NFJ9 593 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 OR13G1Q8NGZ3 307 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 RNF133Q8WVZ7 376 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 RAB1CQ92928 201 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 ZMYND19Q96E35 227 aaPredicted RBP11.01□□□□□ -0.65
CNOT1-220ENST00000569916 MEGF10Q96KG7 1140 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 AMELYQ99218 206 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 KCNJ15Q99712 375 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 ABHD6Q9BV23 337 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 BEX2Q9BXY8 128 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 CENPMQ9NSP4 180 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 TMEM106BQ9NUM4 274 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 AP4S1Q9Y587 144 aa11.01□□□□□ -0.65
CNOT1-220ENST00000569916 SELENOFO60613 162 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 MITFO75030 526 aaPredicted RBP11□□□□□ -0.65
CNOT1-220ENST00000569916 CIB2O75838 187 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 IGHV2-5P01817 119 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 MSMBP08118 114 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 SLC2A1P11166 492 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 SLC2A5P22732 501 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 MMP16P51512 607 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 GRB2P62993 217 aaKnown RBP11□□□□□ -0.65
CNOT1-220ENST00000569916 ZNF92Q03936 586 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 TAF13Q15543 124 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 GLYATL3Q5SZD4 288 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 SPATC1Q76KD6 591 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 SHFQ7M4L6 423 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 MRPL21Q7Z2W9 205 aaKnown RBP11□□□□□ -0.65
CNOT1-220ENST00000569916 AMIGO2Q86SJ2 522 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 GLCCI1Q86VQ1 547 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 OR2AE1Q8NHA4 323 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 LRTOMTQ8WZ04 291 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 PLEKHA8Q96JA3 519 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 SIGLEC11Q96RL6 698 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 GABARAPL1Q9H0R8 117 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 LPAR2Q9HBW0 351 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 KRT84Q9NSB2 600 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 PPP1R3CQ9UQK1 317 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 NPTNQ9Y639 398 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 SVEP1Q4LDE5 3571 aa11□□□□□ -0.65
CNOT1-220ENST00000569916 ISPDA4D126 451 aa10.99□□□□□ -0.65
CNOT1-220ENST00000569916 F5H5P2 479 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms