RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 RCN3Q96D15 328 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 DGCR14Q96DF8 476 aaKnown RBP3.68□□□□□ -1.82
CHD9-220ENST00000569794 TSNAXQ99598 290 aaKnown RBP3.68□□□□□ -1.82
CHD9-220ENST00000569794 KLHDC3Q9BQ90 382 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 MRPS26Q9BYN8 205 aaKnown RBP3.68□□□□□ -1.82
CHD9-220ENST00000569794 TOLLIPQ9H0E2 274 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 UPF3AQ9H1J1 476 aaKnown RBP3.68□□□□□ -1.82
CHD9-220ENST00000569794 OR51B6Q9H340 312 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 RDH14Q9HBH5 336 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 TIGARQ9NQ88 270 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 ZNF446Q9NWS9 450 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 PRODH2Q9UF12 536 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 BTNL2Q9UIR0 455 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 CFL2Q9Y281 166 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 ASF1AQ9Y294 204 aa3.68□□□□□ -1.82
CHD9-220ENST00000569794 KDM6BO15054 1643 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 IGLV3-10A0A075B6K4 115 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 KIR2DS1A0A191URI9 304 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 GJE1A6NN92 205 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 KLLNB2CW77 178 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 G3V3Y1 287 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 K7EMT4 169 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 M0R036 132 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 GABRPO00591 440 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 NUPL2O15504 423 aaKnown RBP3.67□□□□□ -1.82
CHD9-220ENST00000569794 GATCO43716 136 aaKnown RBP3.67□□□□□ -1.82
CHD9-220ENST00000569794 MPZL2O60487 215 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 SLC16A7O60669 478 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 CLDN1O95832 211 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 HOXC4P09017 264 aaPredicted RBP3.67□□□□□ -1.82
CHD9-220ENST00000569794 HSPD1P10809 573 aaKnown RBP3.67□□□□□ -1.82
CHD9-220ENST00000569794 CAPN2P17655 700 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 RAB5AP20339 215 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 ZP3P21754 424 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 PRKACGP22612 351 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 G0S2P27469 103 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 BTDP43251 543 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 OR1D4P47884 311 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 HSPA13P48723 471 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 NUP107P57740 925 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 SRPXP78539 464 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 PDIA2Q13087 525 aaKnown RBP3.67□□□□□ -1.82
CHD9-220ENST00000569794 NAB1Q13506 487 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 KIR2DS1Q14954 304 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 TMED2Q15363 201 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 POU2AF1Q16633 256 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 C2CD6Q53TS8 623 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 ACTBL2Q562R1 376 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 UBE2UQ5VVX9 321 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 LPCAT4Q643R3 524 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 FRMPD2BQ6IN97 320 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 CNIH2Q6PI25 160 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 WDR82Q6UXN9 313 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 TMEM179Q6ZVK1 233 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 CARM1Q86X55 608 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 FBXO16Q8IX29 292 aaPredicted RBP3.67□□□□□ -1.82
CHD9-220ENST00000569794 ENTHD1Q8IYW4 607 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 HS3ST5Q8IZT8 346 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 CA13Q8N1Q1 262 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 OR8G5Q8NG78 346 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 C11orf45Q8TAV5 145 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 C11orf52Q96A22 123 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 SLC25A38Q96DW6 304 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 ATXN7L3BQ96GX2 97 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 PGLYRP4Q96LB8 373 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 GPR21Q99679 349 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 AGMATQ9BSE5 352 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 HRASLSQ9HDD0 168 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 ACOT13Q9NPJ3 140 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 BABAM2Q9NXR7 383 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 SPRR3Q9UBC9 169 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 Q9UF83 564 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 ZNF107Q9UII5 783 aaPredicted RBP3.67□□□□□ -1.82
CHD9-220ENST00000569794 RAB23Q9ULC3 237 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 TFR2Q9UP52 801 aa3.67□□□□□ -1.82
CHD9-220ENST00000569794 IGKV1D-8A0A087WSZ0 117 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 IGHV3-38A0A0C4DH36 116 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 A0A1B0GUA9 196 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 C9J4A7 227 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 FTCDNL1E5RQL4 147 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 HPGDSO60760 199 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 DPM1O60762 260 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 H2AFZP0C0S5 128 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 IGFBP5P24593 272 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 GNRHRP30968 328 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 ALDH3B2P48448 385 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 TUFMP49411 452 aaKnown RBP3.66□□□□□ -1.82
CHD9-220ENST00000569794 GNG10P50151 68 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 RAP1GDS1P52306 607 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 AP1S2P56377 157 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 ZNF92Q03936 586 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 ACVR1Q04771 509 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 TSPAN31Q12999 210 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 GUSBP1Q15486 140 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 TRAM1Q15629 374 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 TRIP13Q15645 432 aaPredicted RBP3.66□□□□□ -1.82
CHD9-220ENST00000569794 SGCAQ16586 387 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 GCSAMLQ5JQS6 135 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 VAX1Q5SQQ9 334 aa3.66□□□□□ -1.82
CHD9-220ENST00000569794 FAM27D1Q5T7N8 215 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms