RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 HNRNPCL2B2RXH8 293 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 HNRNPCL3B7ZW38 293 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 LRRN3E7EW58 273 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 HNRNPCL1O60812 293 aaKnown RBP4.79□□□□□ -1.64
CDH13-212ENST00000569144 SNNO75324 88 aaPredicted RBP4.79□□□□□ -1.64
CDH13-212ENST00000569144 OR6A2O95222 327 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 DUS4LO95620 317 aaKnown RBP4.79□□□□□ -1.64
CDH13-212ENST00000569144 MT-ATP6P00846 226 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 IGHG1P01857 330 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 OPN1SWP03999 348 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 AMY1AP04745 511 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 BCHEP06276 602 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 HNRNPCL4P0DMR1 293 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 CD28P10747 220 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 HTR2AP28223 471 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 SLC1A6P48664 564 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 SRP9P49458 86 aaKnown RBP4.79□□□□□ -1.64
CDH13-212ENST00000569144 ZNF133P52736 654 aaPredicted RBP4.79□□□□□ -1.64
CDH13-212ENST00000569144 SLC18A1P54219 525 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 ABCE1P61221 599 aaKnown RBP4.79□□□□□ -1.64
CDH13-212ENST00000569144 MAGOHP61326 146 aaKnown RBP4.79□□□□□ -1.64
CDH13-212ENST00000569144 ARF6P62330 175 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 SLC35A2P78381 396 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 MRPS34P82930 218 aaKnown RBP4.79□□□□□ -1.64
CDH13-212ENST00000569144 PSG4Q00888 419 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 MELKQ14680 651 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 RUNDC3AQ59EK9 446 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 SPANXN4Q5MJ08 99 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 FAM201AQ5SY85 155 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 C10orf128Q5T292 105 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 AGBL2Q5U5Z8 902 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 HHATQ5VTY9 493 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 ULK3Q6PHR2 472 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 METAP1DQ6UB28 335 aaPredicted RBP4.79□□□□□ -1.64
CDH13-212ENST00000569144 IGFN1Q86VF2 1251 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 MOGAT3Q86VF5 341 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 ANKRD42Q8N9B4 389 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 ATG16L2Q8NAA4 619 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 NOXO1Q8NFA2 376 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 RAB24Q969Q5 203 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 NABP1Q96AH0 204 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 CLPTM1LQ96KA5 538 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 TEX37Q96LM6 180 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 ZNF347Q96SE7 839 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 RAB18Q9NP72 206 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 KCNK9Q9NPC2 374 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 TBCCD1Q9NVR7 557 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 CTSZQ9UBR2 303 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 MAB21L2Q9Y586 359 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 KPTNQ9Y664 436 aa4.79□□□□□ -1.64
CDH13-212ENST00000569144 A0A0B4J2E0 115 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 A0A1B0GVI7 797 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 A0A1B0GX12 115 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 CENPBD1B2RD01 187 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 RNF13O43567 381 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 ZFPL1O95159 310 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 KRT75O95678 551 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 ABHD16AO95870 558 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 PAHP00439 452 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 IRF2P14316 349 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 H2AFXP16104 143 aaPredicted RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 EEF1B2P24534 225 aaKnown RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 RPL4P36578 427 aaKnown RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 CDKN2CP42773 168 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 RPL14P50914 215 aaKnown RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 CLNS1AP54105 237 aaKnown RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 ERVK-25P63136 954 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 STX3Q13277 289 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 KCNJ8Q15842 424 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 CDONQ4KMG0 1287 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 DMRTC1Q5HYR2 192 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 ZNF529Q6P280 563 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 RNF144BQ7Z419 303 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 VMO1Q7Z5L0 202 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 KIRREL3Q8IZU9 778 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 C10orf53Q8N6V4 93 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 OR10AD1Q8NGE0 317 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 WIPF2Q8TF74 440 aaPredicted RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 SLC38A5Q8WUX1 472 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 HAVCR1Q96D42 359 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 CMBLQ96DG6 245 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 TMEM19Q96HH6 336 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 PPP1R36Q96LQ0 422 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 COG8Q96MW5 612 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 PANX1Q96RD7 426 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 SEPHS2Q99611 448 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 CITED2Q99967 270 aaPredicted RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 PAIP2Q9BPZ3 127 aaKnown RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 TMEM43Q9BTV4 400 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 MRPL13Q9BYD1 178 aaKnown RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 OR2H1Q9GZK4 316 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 WNT5BQ9H1J7 359 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 MMADHCQ9H3L0 296 aaPredicted RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 MEAF6Q9HAF1 191 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 PNPOQ9NVS9 261 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 GAR1Q9NY12 217 aaKnown RBP4.78□□□□□ -1.64
CDH13-212ENST00000569144 TAS2R5Q9NYW4 299 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 SELENONQ9NZV5 590 aa4.78□□□□□ -1.64
CDH13-212ENST00000569144 SLC23A1Q9UHI7 598 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms