RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ARPINQ7Z6K5 226 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 NAA40Q86UY6 237 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 FAM162AQ96A26 154 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 TECTBQ96PL2 329 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 HCAR1Q9BXC0 346 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 CHIAQ9BZP6 476 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 FN3KQ9H479 309 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 ANKRD19PQ9H560 264 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 SRA1Q9HD15 236 aaKnown RBP12.91□□□□□ -0.34
NME3-211ENST00000568561 MRGBPQ9NV56 204 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 CTSZQ9UBR2 303 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 MMP24Q9Y5R2 645 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 F5H5K5 113 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 PHYHO14832 338 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 ACSM4P0C7M7 580 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 ANOS1P23352 680 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 GATA4P43694 442 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 COX10Q12887 443 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 SFRP4Q6FHJ7 346 aaPredicted RBP12.9□□□□□ -0.34
NME3-211ENST00000568561 DPY19L2P2Q6ZN68 376 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 C17orf107Q6ZR85 190 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 DCDC5Q6ZRR9 648 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 COLCA1Q6ZS62 124 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 FAM86B1Q8N7N1 296 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 OR11L1Q8NGX0 322 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 OR52J3Q8NH60 311 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 SLCO4A1Q96BD0 722 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 ERMAPQ96PL5 475 aaPredicted RBP12.9□□□□□ -0.34
NME3-211ENST00000568561 NMNAT3Q96T66 252 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 C1RLQ9NZP8 487 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 B9D1Q9UPM9 204 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 AURKCQ9UQB9 309 aa12.9□□□□□ -0.34
NME3-211ENST00000568561 A0A1B0GWJ7 208 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 A0A1W2PRQ8 180 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 ENSAO43768 121 aaKnown RBP12.89□□□□□ -0.35
NME3-211ENST00000568561 TXNDC12O95881 172 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 LCATP04180 440 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 MELTFP08582 738 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 COX4I1P13073 169 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 CPT2P23786 658 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 CRABP1P29762 137 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 CFHR2P36980 270 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 CD200P41217 278 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 RPS6KA3P51812 740 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 RAD23AP54725 363 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 DGCR6Q14129 220 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 KRTAP27-1Q3LI81 207 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 SLC18B1Q6NT16 456 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 DNM1P34Q6PK57 102 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 BRICD5Q6PL45 260 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 Q6YL49 198 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 OR6V1Q8N148 313 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 SLC26A10Q8NG04 563 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 OR4F5Q8NH21 305 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 OR4K13Q8NH42 304 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 FANK1Q8TC84 345 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 Q8TCH9 128 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 TBX15Q96SF7 602 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 PITX2Q99697 317 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 PRDM13Q9H4Q3 707 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 BEX1Q9HBH7 125 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 SMURF1Q9HCE7 757 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 MED4Q9NPJ6 270 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 RPRD1BQ9NQG5 326 aaKnown RBP12.89□□□□□ -0.35
NME3-211ENST00000568561 NDUFAF4Q9P032 175 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 AP3M1Q9Y2T2 418 aa12.89□□□□□ -0.35
NME3-211ENST00000568561 CRYBA1P05813 215 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 CA6P23280 308 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 PSMB10P40306 273 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 MDH1P40925 334 aaKnown RBP12.88□□□□□ -0.35
NME3-211ENST00000568561 RPS27P42677 84 aaKnown RBP12.88□□□□□ -0.35
NME3-211ENST00000568561 KRTAP10-3P60369 221 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 TRAP1Q12931 704 aaKnown RBP12.88□□□□□ -0.35
NME3-211ENST00000568561 OR8G1Q15617 311 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 OLFML2AQ68BL7 652 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 PGM2L1Q6PCE3 622 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 SMARCD3Q6STE5 483 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 OR2AE1Q8NHA4 323 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 RP9Q8TA86 221 aaKnown RBP12.88□□□□□ -0.35
NME3-211ENST00000568561 SPRYD4Q8WW59 207 aaPredicted RBP12.88□□□□□ -0.35
NME3-211ENST00000568561 CCT8L2Q96SF2 557 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 ATF6BQ99941 703 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 KCTD14Q9BQ13 255 aaPredicted RBP12.88□□□□□ -0.35
NME3-211ENST00000568561 ADAT1Q9BUB4 502 aaKnown RBP12.88□□□□□ -0.35
NME3-211ENST00000568561 RASSF4Q9H2L5 321 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 PNRC2Q9NPJ4 139 aaKnown RBP12.88□□□□□ -0.35
NME3-211ENST00000568561 FAM53CQ9NYF3 392 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 V9GYQ6 96 aa12.88□□□□□ -0.35
NME3-211ENST00000568561 C5orf63A6NC05 138 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 ZNF879B4DU55 563 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 TOX4O94842 621 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 FSTL3O95633 263 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 HLA-DQA2P01906 255 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 MMP9P14780 707 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 HIST1H1CP16403 213 aaKnown RBP12.87□□□□□ -0.35
NME3-211ENST00000568561 NUDT2P50583 147 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 MALLQ13021 153 aa12.87□□□□□ -0.35
NME3-211ENST00000568561 C8orf82Q6P1X6 216 aaPredicted RBP12.87□□□□□ -0.35
NME3-211ENST00000568561 PGAP1Q75T13 922 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms