RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	ERVPABLB-1	P60509	514 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	FABP5	Q01469	135 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	MXD1	Q05195	221 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	TNFRSF9	Q07011	255 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	BCL2L1	Q07817	233 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	NAE1	Q13564	534 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	ARHGAP19	Q14CB8	494 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	IRF4	Q15306	451 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	OR4D1	Q15615	310 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	ZNHIT3	Q15649	155 aa	Predicted RBP	4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	RBBP7	Q16576	425 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	RFTN2	Q52LD8	501 aa	Predicted RBP	4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	GCNT6	Q5T4J0	391 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	LIPN	Q5VXI9	398 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	NKAIN2	Q5VXU1	208 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	PGBD2	Q6P3X8	592 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	DOK6	Q6PKX4	331 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	SLC22A25	Q6T423	547 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	PRSS57	Q6UWY2	283 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	RBMS3	Q6XE24	437 aa	Known RBP	4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	SPNS3	Q6ZMD2	512 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	LINGO2	Q7L985	606 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	C16orf82	Q7Z2V1	217 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	OR2W3	Q7Z3T1	314 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	C6orf120	Q7Z4R8	191 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	ARL14	Q8N4G2	192 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	HORMAD2	Q8N7B1	307 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	LMNTD1	Q8N9Z9	388 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	OR2AK2	Q8NG84	335 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	OR1J2	Q8NGS2	313 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	OR1J1	Q8NGS3	322 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	OR2A12	Q8NGT7	310 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	OR2L8	Q8NGY9	312 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	OR10J5	Q8NHC4	309 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	BBS10	Q8TAM1	723 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	C2CD4C	Q8TF44	421 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	SORCS1	Q8WY21	1168 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	MAFIP	Q8WZ33	124 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	OR8D1	Q8WZ84	308 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	TADA1	Q96BN2	335 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	TM4SF18	Q96CE8	201 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	SLC41A3	Q96GZ6	507 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	PPP1R16A	Q96I34	528 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	SAMD8	Q96LT4	415 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	ZNF385A	Q96PM9	386 aa	Known RBP	4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	PANX1	Q96RD7	426 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	ABHD1	Q96SE0	405 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	STAC	Q99469	402 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	NRIP2	Q9BQI9	281 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	PCGF1	Q9BSM1	259 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	FUZ	Q9BT04	418 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	C1QTNF6	Q9BXI9	259 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	C1orf198	Q9H425	327 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	PDF	Q9HBH1	243 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	RDH14	Q9HBH5	336 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	KLHL9	Q9P2J3	617 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	SLC25A13	Q9UJS0	675 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	CLEC4E	Q9ULY5	219 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	TNFSF18	Q9UNG2	199 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	RCE1	Q9Y256	329 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	PPIL1	Q9Y3C6	166 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	FAM96B	Q9Y3D0	163 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	GOLT1B	Q9Y3E0	138 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947		V9GYS6	101 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	WDFY3	Q8IZQ1	3526 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	ASXL3	Q9C0F0	2248 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	LOC400499	M0QZD8	3231 aa		4.29	□□□□□ -1.72
CBFB-208	ENST00000567947	ASPM	Q8IZT6	3477 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947		A0A087WWC5	75 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	TRBV6-7	A0A0A0MS04	114 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	TMEM269	A0A1B0GVZ9	245 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947		A0A1B0GW64	132 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ANKRD20A5P	A0PJZ0	165 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	NCF1B	A6NI72	391 aa	Predicted RBP	4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	FAM90A20P	A6NIJ5	464 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947		A8MWP6	167 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947		A8MXE2	369 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PRAMEF26	H0Y7S4	382 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947		M0R143	59 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	DLEU1	O43261	78 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	TXNL1	O43396	289 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SYT7	O43581	403 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PLPP2	O43688	288 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	KDELR3	O43731	214 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ICOSLG	O75144	302 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	SOCS5	O75159	536 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ARL6IP5	O75915	188 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	CD160	O95971	181 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	GCG	P01275	180 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	GBA	P04062	536 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	IFNW1	P05000	195 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	ATP1B1	P05026	303 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	FGF1	P05230	155 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	HLA-DQB2	P05538	268 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	PRSS2	P07478	247 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	OR5AC1	P0C628	307 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	IRF1	P10914	325 aa		4.28	□□□□□ -1.72
CBFB-208	ENST00000567947	CD59	P13987	128 aa		4.28	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms