RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 LNX2Q8N448 690 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 KLHL36Q8N4N3 616 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 SPICQ8N5J4 248 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 AQP11Q8NBQ7 271 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 PROKR2Q8NFJ6 384 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 OR2T33Q8NG76 320 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 OR8G5Q8NG78 346 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 OR4C15Q8NGM1 316 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 OR8D4Q8NGM9 314 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 OR2T4Q8NH00 348 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 OR2T29Q8NH02 315 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 ST7LQ8TDW4 575 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 ITLN1Q8WWA0 313 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 ASB9Q96DX5 294 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 FAHD2AQ96GK7 314 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 LRGUKQ96M69 825 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 ZNF582Q96NG8 517 aaPredicted RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 OR2V2Q96R30 315 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 SIGLEC11Q96RL6 698 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 DDOQ99489 341 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 SLC30A2Q9BRI3 323 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 C19orf24Q9BVV8 132 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 RBM4Q9BWF3 364 aaKnown RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 HCAR1Q9BXC0 346 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 C1QTNF5Q9BXJ0 243 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 DGCR6LQ9BY27 220 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 PLA2G12AQ9BZM1 189 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 FN3KQ9H479 309 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 METTL17Q9H7H0 456 aaPredicted RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 REEP1Q9H902 201 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 GCM1Q9NP62 436 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 PNRC2Q9NPJ4 139 aaKnown RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 DDX28Q9NUL7 540 aaKnown RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 TMEM106BQ9NUM4 274 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 TBC1D23Q9NUY8 699 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 MRPL22Q9NWU5 206 aaKnown RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 PTTG3PQ9NZH4 202 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 PCDHB10Q9UN67 800 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 SAMHD1Q9Y3Z3 626 aaKnown RBP4.04□□□□□ -1.76
CLK3-219ENST00000567805 U3KQV3 271 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 ARHGAP32A7KAX9 2087 aa4.04□□□□□ -1.76
CLK3-219ENST00000567805 LOC105371242A0A075B767 164 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 ARRDC5A6NEK1 342 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 TMEM178BH3BS89 294 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 M0R135 149 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 MLNRO43193 412 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 FSTL3O95633 263 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 IFNGP01579 166 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 LCATP04180 440 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 SBK2P0C263 348 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 ZNF3P17036 446 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 CPT2P23786 658 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 FMO3P31513 532 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 OTX1P32242 354 aaPredicted RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 PYCR1P32322 319 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 MDH2P40926 338 aaKnown RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 RPS27P42677 84 aaKnown RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 GATA4P43694 442 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 SRP9P49458 86 aaKnown RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 ENTPD1P49961 510 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 BLVRAP53004 296 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 SLC25A1P53007 311 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 LCN2P80188 198 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 SRSF2Q01130 221 aaKnown RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 MS4A2Q01362 244 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 DBPQ10586 325 aaPredicted RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 PPP1R8Q12972 351 aaKnown RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 CRMP1Q14194 572 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 GK2Q14410 553 aaPredicted RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 ZMYND11Q15326 602 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 PCK2Q16822 640 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 ZNF181Q2M3W8 571 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 TEX30Q5JUR7 227 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 DRAM2Q6UX65 266 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 CD300LDQ6UXZ3 194 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 C1orf229Q6ZS94 237 aaPredicted RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 USP43Q70EL4 1123 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 PGAP1Q75T13 922 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 C1QL2Q7Z5L3 287 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 LRRC28Q86X40 367 aaPredicted RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 C1orf87Q8N0U7 546 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 MUC20Q8N307 709 aaPredicted RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 CELF2-AS1Q8N7Q2 184 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 ATG16L2Q8NAA4 619 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 CYB561A3Q8NBI2 242 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 SLC37A3Q8NCC5 494 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 BHLHE23Q8NDY6 225 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 OR10G2Q8NGC3 310 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 OR10AD1Q8NGE0 317 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 NANPQ8TBE9 248 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 TEX47Q8TBZ9 253 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 ZNF418Q8TF45 676 aaPredicted RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 ZFAND2BQ8WV99 257 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 SPTSSAQ969W0 71 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 CCDC124Q96CT7 223 aaKnown RBP4.03□□□□□ -1.76
CLK3-219ENST00000567805 ZNF799Q96GE5 643 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 MAP6Q96JE9 813 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 MEGF10Q96KG7 1140 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 NIPSNAP1Q9BPW8 284 aa4.03□□□□□ -1.76
CLK3-219ENST00000567805 THTPAQ9BU02 230 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms