RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 SPAG4Q9NPE6 437 aa12.76□□□□□ -0.37
CDR2-206ENST00000567406 KRCC1Q9NPI7 259 aaPredicted RBP12.76□□□□□ -0.37
CDR2-206ENST00000567406 PNRC2Q9NPJ4 139 aaKnown RBP12.76□□□□□ -0.37
CDR2-206ENST00000567406 TNFRSF19Q9NS68 423 aa12.76□□□□□ -0.37
CDR2-206ENST00000567406 MIOXQ9UGB7 285 aa12.76□□□□□ -0.37
CDR2-206ENST00000567406 ATPIF1Q9UII2 106 aa12.76□□□□□ -0.37
CDR2-206ENST00000567406 SAMD4AQ9UPU9 718 aaKnown RBP12.76□□□□□ -0.37
CDR2-206ENST00000567406 TRAV40A0A0B4J280 105 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 J3QW42 95 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 NDUFAB1O14561 156 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 OR10H3O60404 316 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 LCATP04180 440 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 SEMG1P04279 462 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 PSKH1P11801 424 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 OMGP23515 440 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 SLC6A6P31641 620 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 PYCR1P32322 319 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 GGT2P36268 569 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 TRAP1Q12931 704 aaKnown RBP12.75□□□□□ -0.37
CDR2-206ENST00000567406 ZNF404Q494X3 552 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 LYPD4Q6UWN0 246 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 BTNL3Q6UXE8 466 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 BRD3OSQ6XYD6 125 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 COLCA1Q6ZS62 124 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 BOLLQ8N9W6 283 aaKnown RBP12.75□□□□□ -0.37
CDR2-206ENST00000567406 ZNRF4Q8WWF5 429 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 CMTM5Q96DZ9 223 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 NEIL1Q96FI4 390 aaPredicted RBP12.75□□□□□ -0.37
CDR2-206ENST00000567406 ATF6BQ99941 703 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 NSRP1Q9H0G5 558 aaKnown RBP12.75□□□□□ -0.37
CDR2-206ENST00000567406 UNKLQ9H9P5 680 aaKnown RBP12.75□□□□□ -0.37
CDR2-206ENST00000567406 MRPL22Q9NWU5 206 aaKnown RBP12.75□□□□□ -0.37
CDR2-206ENST00000567406 TMCC3Q9ULS5 477 aa12.75□□□□□ -0.37
CDR2-206ENST00000567406 TVP23AA6NH52 213 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 IFNL4K9M1U5 179 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 FAM20BO75063 409 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 GMNNO75496 209 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 NOS3P29474 1203 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 RRM2P31350 389 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 PITPNBP48739 271 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 GNGT1P63211 74 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 CLEC12AQ5QGZ9 265 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 SFRP4Q6FHJ7 346 aaPredicted RBP12.74□□□□□ -0.37
CDR2-206ENST00000567406 LRRN1Q6UXK5 716 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 ZBTB46Q86UZ6 589 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 CYB561A3Q8NBI2 242 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 OR8B3Q8NGG8 313 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 OR51L1Q8NGJ5 315 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 OR10S1Q8NGN2 331 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 OR2AJ1Q8NGZ0 328 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 DACT3Q96B18 629 aaPredicted RBP12.74□□□□□ -0.37
CDR2-206ENST00000567406 MAP6Q96JE9 813 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 OR8B2Q96RD0 313 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 NUDT16L1Q9BRJ7 211 aaKnown RBP12.74□□□□□ -0.37
CDR2-206ENST00000567406 EGLN3Q9H6Z9 239 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 GORASP2Q9H8Y8 452 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 CYB5R1Q9UHQ9 305 aa12.74□□□□□ -0.37
CDR2-206ENST00000567406 LRRC30A6NM36 301 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 C22orf46C9J442 243 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 ARPC3O15145 178 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 PLATP00750 562 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 RNASE1P07998 156 aaKnown RBP12.73□□□□□ -0.37
CDR2-206ENST00000567406 CA6P23280 308 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 GSSP48637 474 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 FGF12P61328 243 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDR2-206ENST00000567406 DEFB112Q30KQ8 113 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 SNAI3Q3KNW1 292 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 WDR25Q64LD2 544 aaPredicted RBP12.73□□□□□ -0.37
CDR2-206ENST00000567406 RUSC1-AS1Q66K80 236 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 PGM2L1Q6PCE3 622 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 SHISA2Q6UWI4 295 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 ZNF841Q6ZN19 808 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 PGAP1Q75T13 922 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 OR2AE1Q8NHA4 323 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 SPRYD4Q8WW59 207 aaPredicted RBP12.73□□□□□ -0.37
CDR2-206ENST00000567406 SLC25A28Q96A46 364 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 UPRTQ96BW1 309 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 PLEKHA8Q96JA3 519 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 RASSF4Q9H2L5 321 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 N6AMT1Q9Y5N5 214 aa12.73□□□□□ -0.37
CDR2-206ENST00000567406 KIR2DS1A0A191URI9 304 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 A0A1B0GWJ7 208 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 HOXA3O43365 443 aaPredicted RBP12.72□□□□□ -0.37
CDR2-206ENST00000567406 IRF2P14316 349 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 MDKP21741 143 aaPredicted RBP12.72□□□□□ -0.37
CDR2-206ENST00000567406 MTNR1AP48039 350 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 RAD23AP54725 363 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 SMIM11AP58511 58 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 ZNF92Q03936 586 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 POU4F2Q12837 409 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 MALLQ13021 153 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 OR8G1Q15617 311 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 ZNF181Q2M3W8 571 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 SLC36A3Q495N2 470 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 PRR31Q5SQ13 230 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 PGBD2Q6P3X8 592 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 ZNF620Q6ZNG0 422 aa12.72□□□□□ -0.37
CDR2-206ENST00000567406 MRPL21Q7Z2W9 205 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms