RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 SMPD2O60906 423 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 SERPINB7O75635 380 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 ATP1B2P14415 290 aaPredicted RBP0.63□□□□□ -2.31
CDH1-211ENST00000567320 TMED10P49755 219 aaKnown RBP0.63□□□□□ -2.31
CDH1-211ENST00000567320 ELF3P78545 371 aaPredicted RBP0.63□□□□□ -2.31
CDH1-211ENST00000567320 ELP6Q0PNE2 266 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 PNOCQ13519 176 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 OR7A5Q15622 319 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 EXOC3L2Q2M3D2 409 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 GPR107Q5VW38 600 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 MRPL55Q7Z7F7 128 aaKnown RBP0.63□□□□□ -2.31
CDH1-211ENST00000567320 FAM9BQ8IZU0 186 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 OR2T3Q8NH03 318 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 SLC7A13Q8TCU3 470 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 RSPH9Q9H1X1 276 aaPredicted RBP0.63□□□□□ -2.31
CDH1-211ENST00000567320 SLC35D1Q9NTN3 355 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 NUP50Q9UKX7 468 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 SNX6Q9UNH7 406 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 LRRIQ3A6PVS8 624 aaPredicted RBP0.62□□□□□ -2.31
CDH1-211ENST00000567320 K7EPI3 171 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 TMEM50AO95807 157 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 KRT8P05787 483 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 HSPA5P11021 654 aaKnown RBP0.62□□□□□ -2.31
CDH1-211ENST00000567320 ETS2P15036 469 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 PRKACBP22694 351 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 GPX4P36969 197 aaPredicted RBP0.62□□□□□ -2.31
CDH1-211ENST00000567320 POLR2FP61218 127 aaKnown RBP0.62□□□□□ -2.31
CDH1-211ENST00000567320 TGFBIQ15582 683 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 IMMTQ16891 758 aaKnown RBP0.62□□□□□ -2.31
CDH1-211ENST00000567320 EGFL6Q8IUX8 553 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 MS4A15Q8N5U1 240 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 GPR26Q8NDV2 337 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 OR4C13Q8NGP0 309 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 GHSRQ92847 366 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 TMEM230Q96A57 120 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 C20orf166-AS1Q96NR2 134 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 TMEM43Q9BTV4 400 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 TMEM243Q9BU79 118 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 SAMD10Q9BYL1 202 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 RIBC2Q9H4K1 309 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 RMND5AQ9H871 391 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 PDP1Q9P0J1 537 aaPredicted RBP0.62□□□□□ -2.31
CDH1-211ENST00000567320 SUN2Q9UH99 717 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 SH3BGRL2Q9UJC5 107 aa0.62□□□□□ -2.31
CDH1-211ENST00000567320 FARSAQ9Y285 508 aaKnown RBP0.62□□□□□ -2.31
CDH1-211ENST00000567320 A0A0J9YXV3 536 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 SNTNA6NMZ2 147 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 TNFRSF11BO00300 401 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 PLPP1O14494 284 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 SNNO75324 88 aaPredicted RBP0.61□□□□□ -2.31
CDH1-211ENST00000567320 CLPXO76031 633 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 TSPAN12O95859 305 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 MT-ND4P03905 459 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 CTRB1P17538 263 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 U2AF2P26368 475 aaKnown RBP eCLIP0.61□□□□□ -2.31
CDH1-211ENST00000567320 TAS2R46P59540 309 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 KCNJ2P63252 427 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 ZNF266Q14584 549 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 CCDC92Q53HC0 331 aaPredicted RBP0.61□□□□□ -2.31
CDH1-211ENST00000567320 PDZD11Q5EBL8 140 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 LIN9Q5TKA1 542 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 PDCD1LG2Q9BQ51 273 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 MYOZ1Q9NP98 299 aaPredicted RBP0.61□□□□□ -2.31
CDH1-211ENST00000567320 MED4Q9NPJ6 270 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 CSDC2Q9Y534 153 aaKnown RBP0.61□□□□□ -2.31
CDH1-211ENST00000567320 LRRC42Q9Y546 428 aa0.61□□□□□ -2.31
CDH1-211ENST00000567320 NOTCH1P46531 2555 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 NRASP01111 189 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 HRASP01112 189 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 KRASP01116 189 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 IGHMP01871 453 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 TGM4P49221 684 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 SEC61GP60059 68 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 GK3PQ14409 553 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 KRTAP25-1Q3LHN0 102 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 CCDC152Q4G0S7 254 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 KCTD16Q68DU8 428 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 H2BFWTQ7Z2G1 175 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 PLPPR1Q8TBJ4 325 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 LIN28AQ9H9Z2 209 aaKnown RBP0.6□□□□□ -2.31
CDH1-211ENST00000567320 NT5MQ9NPB1 228 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 DYRK4Q9NR20 520 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 ETNK2Q9NVF9 386 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 SSH2Q76I76 1423 aa0.6□□□□□ -2.31
CDH1-211ENST00000567320 TRGV4A0A0C4DH28 118 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 A8MWL6 223 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 IGHG2P01859 326 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 SERPIND1P05546 499 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 PRPS1L1P21108 318 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 KITLGP21583 273 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 CD86P42081 329 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 ACAA2P42765 397 aaKnown RBP0.59□□□□□ -2.31
CDH1-211ENST00000567320 LGALS7P47929 136 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 PRR3P79522 188 aaKnown RBP0.59□□□□□ -2.31
CDH1-211ENST00000567320 CUL2Q13617 745 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 ZNF726P1Q15940 193 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 LDLRAD2Q5SZI1 272 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 EFL1Q7Z2Z2 1120 aaKnown RBP0.59□□□□□ -2.31
CDH1-211ENST00000567320 TMEM150AQ86TG1 271 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 NPWQ8N729 165 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms