RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PSMB10P40306 273 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 RAD23AP54725 363 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 PSME3P61289 254 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 GNB2P62879 340 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 IL13RA1P78552 427 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 HOXA4Q00056 320 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-213ENST00000565173 GK2Q14410 553 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-213ENST00000565173 MPPED2Q15777 294 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 CLEC12AQ5QGZ9 265 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 WDR25Q64LD2 544 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-213ENST00000565173 GLYATQ6IB77 296 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 PGM2L1Q6PCE3 622 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 C16orf87Q6PH81 154 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 LYPD2Q6UXB3 125 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 BTNL3Q6UXE8 466 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 PIGWQ7Z7B1 504 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 ZBTB46Q86UZ6 589 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 CELF2-AS1Q8N7Q2 184 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 OR52J3Q8NH60 311 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 NEIL1Q96FI4 390 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-213ENST00000565173 NMNAT3Q96T66 252 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 DDOQ99489 341 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 NUDT16L1Q9BRJ7 211 aaKnown RBP7.15□□□□□ -1.26
CAPN3-213ENST00000565173 CDADC1Q9BWV3 514 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 CYB5R1Q9UHQ9 305 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 RPS6KA6Q9UK32 745 aa7.15□□□□□ -1.26
CAPN3-213ENST00000565173 FAM32AQ9Y421 112 aaKnown RBP7.15□□□□□ -1.26
CAPN3-213ENST00000565173 C5orf63A6NC05 138 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 C22orf46C9J442 243 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 F5H5K5 113 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 NDUFAB1O14561 156 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 HOXA3O43365 443 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-213ENST00000565173 FAM20BO75063 409 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 PTBP3O95758 552 aaKnown RBP7.14□□□□□ -1.27
CAPN3-213ENST00000565173 MDKP21741 143 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-213ENST00000565173 CD200P41217 278 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 MTNR1AP48039 350 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 PITPNBP48739 271 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 CENPAP49450 140 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 NUDT2P50583 147 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 TRAP1Q12931 704 aaKnown RBP7.14□□□□□ -1.27
CAPN3-213ENST00000565173 ECH1Q13011 328 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 DEFB112Q30KQ8 113 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 DNM1P34Q6PK57 102 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 TREML4Q6UXN2 200 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 BRD3OSQ6XYD6 125 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 DCDC5Q6ZRR9 648 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 LINC00346Q8IVM7 164 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 C19orf18Q8NEA5 215 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 OR10S1Q8NGN2 331 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 OR4K13Q8NH42 304 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 ZNRF4Q8WWF5 429 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 ERGIC1Q969X5 290 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 SLCO4A1Q96BD0 722 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 PLEKHA8Q96JA3 519 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 MAP6Q96JE9 813 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 PITX2Q99697 317 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 ATF6BQ99941 703 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 HCAR1Q9BXC0 346 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 SLITRK2Q9H156 845 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 MYLK2Q9H1R3 596 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 OR52D1Q9H346 318 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 GORASP2Q9H8Y8 452 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 RPRD1BQ9NQG5 326 aaKnown RBP7.14□□□□□ -1.27
CAPN3-213ENST00000565173 MRPL22Q9NWU5 206 aaKnown RBP7.14□□□□□ -1.27
CAPN3-213ENST00000565173 AURKCQ9UQB9 309 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 POLR1DQ9Y2S0 133 aa7.14□□□□□ -1.27
CAPN3-213ENST00000565173 TRAV40A0A0B4J280 105 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 LRRC30A6NM36 301 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 FCN3O75636 299 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 DCTN3O75935 186 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 LCATP04180 440 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 PSKH1P11801 424 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 MMP9P14780 707 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 SLC6A6P31641 620 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 GSSP48637 474 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 FGF12P61328 243 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 ZNF92Q03936 586 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 SNAI3Q3KNW1 292 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 ZNF362Q5T0B9 420 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-213ENST00000565173 PRAMEF6Q5VXH4 476 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 Q6YL49 198 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 PGAP1Q75T13 922 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 NLRC3Q7RTR2 1065 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 C1orf87Q8N0U7 546 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 RNF148Q8N7C7 305 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 CCDC197Q8NCU1 140 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 OR8B3Q8NGG8 313 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 TMIGD2Q96BF3 282 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 PYURFQ96I23 114 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 OR8B2Q96RD0 313 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 FN3KQ9H479 309 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 UFSP2Q9NUQ7 469 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 CTSZQ9UBR2 303 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 CLN8Q9UBY8 286 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 TMCC3Q9ULS5 477 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 SAMD4AQ9UPU9 718 aaKnown RBP7.13□□□□□ -1.27
CAPN3-213ENST00000565173 MMP24Q9Y5R2 645 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 DOCK11Q5JSL3 2073 aa7.13□□□□□ -1.27
CAPN3-213ENST00000565173 CENPVL3A0A0U1RRI6 287 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms